Hordeum vulgare subsp. vulgare (domesticated barley): 123442732
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Entry
123442732 CDS
T11213
Name
(RefSeq) vacuolar protein sorting-associated protein 60.1-like
KO
K12198
charged multivesicular body protein 5
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123442732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123442732
Membrane trafficking [BR:
hvg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
123442732
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
COG6_N
DUF948
SOAR
Med4
HTH_Tnp_Tc5
Prefoldin
FliJ
Motif
Other DBs
NCBI-GeneID:
123442732
NCBI-ProteinID:
XP_044974795
UniProt:
F2DV75
LinkDB
All DBs
Position
3H:27448812..27451456
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AA seq
228 aa
AA seq
DB search
MKKIFGAKKNKDPPPTIQDATSQINKRGESVDEKIKKLDEELARYKEQIRKARPGPSQEA
IKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVGFAADGLKDAQQTMNAMKAANKELKGMM
KTVKIEDIDNMQDEMTDLMDVSNEIQESLGRSYNIPDDVDEEDLMGELDALEADMEFESA
AVPSYLQPDEEADLNLPAAPTYPAAVPVSRHQEDELGLPPVPRASLRS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatcttcggagccaagaagaacaaggacccgccgcccaccatccaggacgcc
accagccaaataaacaagcggggcgagagcgtggacgagaagatcaagaagctggacgag
gagctggcgcggtacaaggagcagatccgcaaggcccgccccggcccctcgcaggaggcc
atcaaggcccgcgccatcaggctcctcaagcacaagcgcatgtacgaggagcagcgcaac
atgctctacaaccagacctacaacctcgaccaggtcggcttcgccgccgacggcctcaag
gacgcgcagcagaccatgaatgcgatgaaggccgccaacaaggagctaaaggggatgatg
aagactgtgaagattgaggacatcgataatatgcaagatgaaatgacggatctgatggac
gtgagcaatgaaatacaagaatctcttggtagaagctacaacatccctgatgatgttgac
gaggaagatctaatgggagagctggatgctctggaagctgatatggagtttgagtcagct
gcagtcccttcgtaccttcagccagatgaggaagctgatcttaacttgcctgctgcaccg
acttatcctgcagcagttccagtaagcaggcaccaggaggacgagcttggactgccaccg
gtacctcgagcatcgctccgtagttag
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