Hordeum vulgare subsp. vulgare (domesticated barley): 123442959
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Entry
123442959 CDS
T11213
Name
(RefSeq) protein GIGANTEA
KO
K12124
GIGANTEA
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123442959
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NCBI-GeneID:
123442959
NCBI-ProteinID:
XP_044975087
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Position
3H:56444357..56454056
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AA seq
1155 aa
AA seq
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MSASNGKWIDGLQFSSLFWPPPHDAQQKQAQILAYVEYFGQFTSDSEQFPEDVAQLIQTC
YPSKEKRLVDEVLATFVLHHPEHGHAVVHPILSRIIDGTLSYDSHGSPFNSFISLFTQSS
EKEYSEQWALACGEILRVLTHYNRPIFKVADCNNTSDQATTSCSAQEKANYSPGNEPERK
PLRPLSPWITDILLTAPLGIRSDYFRWCGGVMGKYAAGGELKPPTTAYSRGAGKHPQLMP
STPRWAVANGAGVILSVCDEEVARYETANLTAAAVPALLLPPPTTPLDEHLVAGLPPLEP
YARLFHRYYAIATPSATQRLLFGLLEAPPSWAPDALDAAVQLVELLRAAEDYATGMRLPK
NWLHLHFLRAIGTAMSMRAGIAADTAAALLFRILSQPTLLFPPLRHAEGVEVQHEPLGGY
VSSYKRQLEVPASETTIDATAQGIASLLCAHGPDVEWRICTIWEAAYGLLPLNSSAVDLP
EIVVAAPLQPPTLSWSLYLPLLKVFEYLPRGSPSEACLMRIFVATVEAILRRTFPSETSE
SSKRPRSQSKNLAVAELRTMIHSLFVESCASMNLASRLLFVVLTVCVSHQALPGGSKRPT
GSENHSSEEATEDPRLTNGRNKVKKKQGPVGTFDSYVLAAVCALSCELQLFPILCKSATN
SKVKDSIKILKPGKNNGISNELQNSISSAILHTRRILGILEALFSLKPSSVGTSWNYSSN
EIVAAAMVAAHVSELFRRSRPCLNALSSLKRCKWDAEISTRASSLYHLIDLHGKTVSSIV
NKAEPLEAHLTFTSVKRDGQQHIEENSTSSSGNGNLEKKNASASHMKNGFSRPLLKCSEE
ARRNGNVASTSGKVPATLQAEASDLANFLTMDRNGGYRGSQTLLSSVISEKQELCFSVVS
LLWHKLIASPETQMSAESTSAHQGWRKVVDALCDVVSASPAKASTAIVLQAEKDLQPWIA
RDDEEGQKMWRVNQRIVKLIAELMRNHDSPEALIILASASDLLLRATDGMLVDGEACTLP
QLELLEVTARAIHLIVEWGDPGVAVADGLSNLLKCRLSPTIRCLSHASAHVRALSMSVLR
DILNSGPLGSSKTIQGEQRNGIQSPNYQCAAANTVNWQADVERCIDWEARSRRATGMTLA
FLTAAANELGCPLPC
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgtcaaatgggaagtggattgatggactccagttctcatcactgttctggccc
ccgccacacgatgcgcagcagaaacaggcacaaattttagcctatgttgagtactttggt
cagttcacatctgacagcgagcaattcccggaggatgtagctcagctaattcaaacttgc
tatccatcaaaagaaaagcggttggtagatgaagtattagcaacttttgttctccatcac
cccgagcatggtcatgcagttgtacatccaattctttcacgcatcatagacgggacactg
agttatgatagtcatggttccccattcaattccttcatctccttatttacccaaagttct
gagaaagagtactcagagcagtgggccttggcctgtggagagattcttagagttctaact
cactacaacaggccaatctttaaagttgcagactgtaacaacacctctgaccaggctaca
acaagttgttctgcacaggagaaagctaattactctccaggaaatgaacctgaacggaag
ccattgaggccattatctccttggatcacagatattttgctaactgcacctttaggcatt
agaagcgactattttagatggtgtggtggagttatgggaaaatacgcagctggtggagaa
ttgaagcctccaacaactgcttacagccgaggagctggtaagcacccacaactcatgcca
tccaccccaagatgggctgttgccaatggagctggagttattttaagtgtctgtgatgag
gaagtagctcgttatgagacagcaaacttaaccgcggcagctgttcccgcccttctgcta
cctccaccgacaacacccttggatgagcatttggtggcagggctaccccctcttgagcca
tacgctcgcttgtttcatagatactatgcaattgccacaccaagtgctacacaaagattg
ctttttggtcttcttgaagcaccaccatcatgggctccagatgcacttgatgcagcagtt
cagcttgttgaactccttcgggcagctgaagattatgctactggcatgcggcttccaaaa
aattggttgcatcttcatttcttgcgtgcgattggaactgcaatgtctatgagggctggt
attgctgccgatacagctgctgcgttgctttttcgcatactatcccaaccaacgttgctt
tttcctccactaaggcatgctgaaggagttgaagtgcaacatgaaccactgggtggctat
gtatcatcatacaaaagacagctggaagttcctgcatctgaaaccacaattgatgccact
gcacaaggcattgcttccttgctgtgtgctcatggtcctgatgttgagtggagaatatgt
accatctgggaagctgcctatggtttgttacctctgaattcatcagcagttgatttgccc
gaaatcgttgtagctgctccgcttcagccacctactttgtcatggagcctatacttgcca
ctgttgaaagtattcgagtatctacctcgtggaagtccatctgaagcatgccttatgaga
atatttgtggcaacagttgaagctatactcagaagaactttcccttcggaaacctctgaa
tcatctaaaagaccaagaagtcaatccaagaaccttgctgttgctgaactccgtacaatg
atacattcactctttgttgaatcatgtgcttcaatgaaccttgcttcccggttgttgttt
gttgtattaactgtttgcgtcagtcatcaagctttgccagggggcagcaaaagaccaacg
ggtagtgaaaaccattcttctgaggaggccactgaggacccaagattaaccaatggaaga
aataaggtcaagaagaaacaagggcctgttggtacatttgactcgtatgtgctggctgct
gtttgtgccttatcttgtgagcttcagctgttccctatcctttgcaagagtgcaacaaac
tcaaaagtaaaagactctataaagatcctgaagcctggaaaaaacaatgggatcagtaat
gagctacagaatagcattagctcagcaattctccatactcgtagaattcttggcatcctg
gaagctcttttctccttgaagccatcatcagttggtacctcctggaactatagttcaaat
gagatagttgcagcggctatggttgccgctcatgtttctgagttatttcgccggtcgagg
ccatgcctaaatgcactatcttcactgaagcgatgtaagtgggatgctgagatttctacc
agggcatcatccctttaccatttgatcgatttgcatggtaaaactgtgtcctccatcgtg
aacaaagctgagcctctagaagctcacctgacttttacatcagtaaagagagatggtcaa
caacacattgaggaaaacagcaccagctcatcgggtaatggcaacttggaaaagaagaat
gcttcagcctcacacatgaaaaatggtttttcaagaccactcttgaaatgctcagaagag
gctaggcgaaatggtaatgttgcaagtacatccgggaaagttcctgcaactttacaggct
gaagcatctgatttggctaacttccttaccatggatagaaatgggggttatcgaggctct
cagactctcctaagttctgttatctcagaaaaacaggaattatgcttctctgttgtctca
ttgctctggcataagcttattgcatctcctgaaacgcagatgtctgcagaaagtacatca
gctcatcaaggttggagaaaggttgtagatgccctttgtgatgttgtttcagcctcacca
gccaaggcttcaactgctattgttctgcaggctgagaaggacctacagccctggattgct
cgagatgacgaggaaggtcaaaagatgtggagagtcaaccagcgaatagttaaactgata
gctgagcttatgaggaaccatgatagcccagaagcattgataattcttgctagtgcttca
gaccttctgcttcgtgctacagatgggatgcttgttgatggtgaagcttgtaccttgcct
cagttagagctcctggaagtaactgctagagctattcatctcatcgttgaatggggagac
ccaggtgtagcagttgctgatggcctctcaaatctgttaaagtgccgtctatcgcctacc
atccgctgcctctcccacgctagcgcacacgtacgagcgctcagcatgtccgtcctccgt
gacatcttgaacagtggaccactaggttccagtaagaccattcaaggcgagcaacggaac
ggcatccaaagcccaaactaccaatgcgcggcagcaaacacggtgaactggcaagcggat
gtcgagagatgtatagactgggaagcccgcagccgccgtgccaccgggatgaccctcgcc
ttcctcaccgctgctgctaacgagctgggctgcccccttccttgctga
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