Hordeum vulgare subsp. vulgare (domesticated barley): 123442992
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Entry
123442992 CDS
T11213
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1-like isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123442992
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hvg01007
]
123442992
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hvg03016
]
123442992
Enzymes [BR:
hvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
123442992
Amino acid related enzymes [BR:
hvg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
123442992
Transfer RNA biogenesis [BR:
hvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123442992
Prokaryotic type
123442992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
123442992
NCBI-ProteinID:
XP_044975132
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All DBs
Position
3H:complement(66624994..66632972)
Genome browser
AA seq
1086 aa
AA seq
DB search
MEKVIPVSSAPIDGSLCSRASDSSFAGLVQPVAQAPEKAASEEKLLDDKELELERERKLK
KEQKAREKEEKKLKAKQKEAARLQAQATSDGPKKSEKKQKKKAADDENPEDFIDPETPSG
QKKSLAPQMAKQYSPSTVEKSWYAWWESAGYFGADPASSKPPFVIVLPPPNVTGALHIGH
ALTVAIEDAMIRWRRMSGYNALWVPGVDHAGIATQVVVEKKLMRERKLTRHDIGRDKFIS
EVLKWKDQYGGTILGQLRRLGASLDWSRECFTMDDQRSKAVTEAFVRLHKDGLVYRDYRL
VNWDCTLLTAISDIEVDHLELKEETMLKVPGYSSPVQFGVLISFAYPLEEGLGEIIVATT
RIETMLGDTAIAVHPEDKRYKHLHGKHAIHPFNGRKLKIICDAVLVDPTFGTGAVKITPA
HDPNDFEVGKRHNLEFINIFTDDGKINSNGGAQFEGMPRFAARVAVIDALKEKGLYKDTK
KNEMNLGICSRSNDVVEPMIKPQWFVNCHTMAKAGLDAVRSKKIEIIPQQYEQDWYRWLE
NIRDWCVSRQLWWGHRVPAWYVTLEDEQLSDLGSNNDRWIVARNECDAMLEAQKKYPGKK
FQLNQDPDVLDTWFSSGLFPLTVLGWPDDTADLRAFYPTSVLETGLDILFFWVARMVMMG
MQLGGDVPFQKVYLHPMIRDAHGRKMSKSLGNVVDPLEVINGTTLEDLLKRLEEGNLDQN
ELSVAREGKKKDFPDGIAECGTDALRFALISYTSQSDKINLDIKRVVGYRQWCNKLWNAI
RFAMGKLGDHYTPPATIVVSSMPPVCKWILSVLNKAIGKTVTSLEAYKFADATSAIYSWW
QYQLCDVFIEAVKPYFFNDSHEFDSARAACRDALWVCLDNGLRLLHPFMPYVTEELWQRL
PQPKDSCRKNSIMISEYPSIVKEWADDKLESEIGIILDTVNKLRSLKPTTDTNERRPAFA
LCRGEDIAATVQCYQSLVVSLSSVSSLKILAESDETPPDCSTAVVNKDLSVYLQLQGALN
AEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA
EKKLDA
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtaatcccggtctcatccgctcccattgatggatctctctgctcgcgcgcc
tctgattcgagttttgctggcctcgtgcagcccgtggcgcaggcaccggagaaggcggcg
tcagaggagaagctgcttgacgacaaggagctagagctagagcgggagcggaaactgaag
aaagagcagaaggcaagagagaaggaggagaaaaagctcaaggcaaagcaaaaggaggct
gccaggcttcaggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaag
aagaaggctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtggg
cagaagaaatcgcttgcacctcaaatggctaagcagtatagcccaagtacagtggaaaaa
tcgtggtatgcctggtgggagtcagcaggatatttcggggcagaccctgcaagctcaaaa
ccaccctttgttatagttctaccacctccgaatgtgactggagcgcttcatattggtcat
gcacttacagtggctatagaggacgctatgatacggtggaggagaatgtcgggatataat
gctctgtgggtcccaggagtggaccatgctggcattgctacacaggttgtagttgaaaag
aagctaatgcgtgaaaggaagctgacaaggcatgacataggccgtgacaaatttatatct
gaagttctgaaatggaaagatcagtacggtggcaccatattgggtcaattacgtaggctt
ggggcttcgcttgattggtcccgtgagtgtttcacaatggatgatcaacgatcgaaagct
gtaaccgaagcatttgttaggttgcacaaagatggcctagtttacagggactaccgcctt
gtgaattgggactgcacacttttaacagcaatatctgacatagaggtggatcatctagag
cttaaagaggaaactatgttgaaggtccctggttacagcagtcctgtacagtttggtgtg
ttgatatcctttgcctatcctcttgaagaaggactcggtgaaattattgtcgcaacaaca
agaattgaaacaatgctcggtgatacggcaatagctgttcatcctgaggataaaaggtat
aaacatctgcatggaaagcatgccattcacccattcaatggccgaaaactcaaaataatc
tgcgatgctgtgctagtggatcccacttttggtactggggctgtcaagattacacctgcc
catgatccaaatgactttgaggttggaaaacgacacaacctagagttcatcaatatcttc
acagatgatgggaagataaacagcaatggaggtgcacaatttgaaggaatgccaagattt
gctgctcgggttgcagttattgatgcactgaaggaaaagggattgtacaaggacacaaaa
aagaatgaaatgaatttgggaatttgttcaagaagtaatgatgtagtggaacctatgata
aagccccaatggtttgttaattgccatacgatggcaaaggcaggtcttgatgctgtaaga
tccaaaaaaattgagattattccgcaacaatatgaacaagactggtacagatggctggaa
aatatacgcgattggtgtgtttcaaggcagctctggtggggacatcgtgtacctgcgtgg
tatgtgacactagaagatgaacaattgagtgatctgggatcaaacaatgaccgttggata
gtcgcaaggaatgaatgtgatgcaatgcttgaggcacagaaaaagtatccggggaagaaa
ttccagttaaatcaagatcctgacgttttggatacttggttttcatctggtctcttccca
ttgacagtgcttggttggccagatgatactgctgatcttcgtgctttctaccctacttca
gtacttgaaactggacttgatattctcttcttctgggtggcacgtatggtgatgatgggt
atgcaacttggtggtgatgtgccatttcagaaggtgtatttgcatcctatgatccgggat
gcacatggccgcaaaatgtccaagtcacttggtaatgttgttgatcccctcgaggtgata
aatggtacgacacttgaagatctcctcaaacgtttggaagaaggcaacctggatcaaaat
gagttaagtgttgcaagagaagggaagaagaaagattttcctgatggcatcgctgaatgt
ggcaccgatgcactccgtttcgcactgatttcttacacttctcagtctgacaagataaat
cttgatatcaagagggttgttggatatcgccaatggtgcaataaattgtggaatgccatt
cgttttgcaatgggcaagcttggtgatcattatactccaccagcaaccattgttgtgtct
tcaatgcccccggtctgcaaatggatactctcggtacttaacaaggctattggcaagact
gtgacctcattagaagcatacaagttcgctgatgcaacatctgctatttactcatggtgg
caataccagctatgtgatgtatttatagaagctgtaaaaccttacttcttcaatgactct
cacgagttcgattcagcaagagctgcttgtagagatgccctatgggtgtgccttgacaat
ggtttgcgtctgctccacccattcatgccttatgtaacagaagaactctggcaacgtctt
cctcagcccaaagattcttgcagaaaaaattccattatgatatcagaatatccatctatt
gttaaggaatgggcggatgataaacttgaaagtgaaattggtattatcttggatactgtg
aacaaactaagatctctgaagccaacgacagatacaaatgaaaggcgacctgcttttgca
ctttgtcgaggcgaagatattgctgccactgttcagtgctatcaatctctagtggtgtct
ctttcttctgtatcgtcgcttaagatcctggcagagagtgatgaaactccacctgactgt
tcaactgctgttgtaaacaaagacctatccgtataccttcagcttcaaggggctctaaat
gcggaagtggagctcgaaaagctaaggaaaaagagggatgaaatccaaaagttacagcat
gccctgtctcagaagatggaagcgtccggttacagagagaaggctccccccagtgtccaa
gaggaggacatgaggaagctcaccgcctttttcgagcaactgcgggtcatcggtgaggct
gagaagaaactagatgcgtaa
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