Hordeum vulgare subsp. vulgare (domesticated barley): 123443095
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Entry
123443095 CDS
T11213
Name
(RefSeq) nucleolar protein dao-5
KO
K03504
DNA polymerase delta subunit 3
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03030
DNA replication
hvg03410
Base excision repair
hvg03420
Nucleotide excision repair
hvg03430
Mismatch repair
hvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123443095
03410 Base excision repair
123443095
03420 Nucleotide excision repair
123443095
03430 Mismatch repair
123443095
03440 Homologous recombination
123443095
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hvg01009
]
123443095
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvg03032
]
123443095
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123443095
Protein phosphatases and associated proteins [BR:
hvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123443095
DNA replication proteins [BR:
hvg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
123443095
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
123443095
MMR (mismatch excision repair)
DNA polymerase delta complex
123443095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
123443095
NCBI-ProteinID:
XP_044975284
UniProt:
A0A8I7B507
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Position
3H:complement(89226445..89231468)
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AA seq
515 aa
AA seq
DB search
MADGALLDLLPQIHALFSDQLRVISYKWLSRNFSVSSNDAKRLLQEFVNKHGTDHEVIYS
VSGWLKNNPENYCVKLTSGPNLEEARRTFKGSCSVQVYSIQACIPKDTAVLWNPEFVQAE
ELFNQPFDEENCLRDNRFCGVRNSFVKRTTTGKHVSSMPPKPTNSVIAPAVPKPSSATKE
QSSIVRQQDLPEPSDPVKETSIKAEKDNASVLDKTVKALAVKEPSVGVHANKTKAQNGKT
LPSNGASLATMWGRASAKPKAPAVIKAKDLPSVAVTADAQICAKEEADADSSDDEKNAHY
KRASNGASNRKRRAIFDCSDDDDDDDDFVAIASPEPLKQRARNPVIEAAQDNISEQNKVE
SKQDTVSDVKGVTKGTDSEFTSECKTSSDNAINPSGITLKEKANEPPIDENKKDHAAETA
STSPKRRKVLKTRIDERGREVTEVVWEGEAPASDKAEKNVTTTDASNRPTLPSKPQPAVN
TDRSNAPSKTAGSKKPAKAAAPKQGKNIMSFFKKV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcgcgctgctcgacctgctgccccagatccacgccctcttctccgaccag
ctccgcgtgatttcgtacaaatggctaagccggaatttttctgtgtcatcaaatgatgcc
aagaggttgcttcaggagtttgtcaacaaacatggaactgatcacgaagttatttacagt
gtgtctgggtggttaaagaacaatcccgagaactattgtgtaaaactcacttcaggccct
aaccttgaagaagcaaggcggacatttaaaggttcttgttcagttcaggtttacagtatc
caggcttgtattccaaaagatactgctgtactttggaatcctgaatttgtgcaggcagag
gagcttttcaaccagccatttgatgaagaaaattgtttgagagataataggttctgtggt
gtaaggaattcttttgtcaagcgaactaccacagggaagcatgtaagctcaatgccccca
aagcctacaaatagtgttatagcacctgcagtgccaaaacctagtagtgctacaaaagag
caatcttctattgttcgacagcaagatctacctgaaccatccgatccagtgaaggaaacc
agcattaaagctgagaaggataatgcctcggtcttggataaaactgttaaggctctggct
gtcaaagagccatcagttggtgtgcatgcaaataaaaccaaagctcagaatgggaagacc
ctacccagtaatggtgcatccctggctaccatgtggggtcgtgcatctgcaaaacccaag
gctccagctgtcattaaagctaaagatctaccaagtgttgctgttacagctgatgcacag
atatgtgcaaaagaagaagcagatgcggatagcagcgatgatgaaaaaaatgcacactac
aagcgggcctctaatggtgcaagtaacagaaagagaagagcgatctttgattgttcagat
gatgatgatgatgatgatgattttgtagccattgcatctccagagccactaaaacagcgt
gccagaaatcctgtcattgaagctgcacaagacaatatatcagaacagaataaagtggaa
agcaaacaggatacagtgagcgatgtgaagggcgtcacaaaagggactgattctgagttt
acctctgaatgcaaaactagcagtgacaatgctatcaacccttctgggatcaccttaaaa
gaaaaggctaatgagccaccaatcgatgaaaataagaaggatcatgctgccgagacagct
tccacctcacctaaaagaaggaaggtcttgaagacacgtatagatgagcgggggagagaa
gtaactgaggttgtctgggagggcgaagctcctgcaagtgataaggcagagaaaaatgtt
accactactgatgccagtaacaggccaactcttccaagcaagccacagccagcagttaac
actgacaggagcaatgctccaagtaaaacagcaggcagcaagaaacctgccaaggctgct
gcccccaagcaaggaaagaacataatgtcattcttcaagaaggtataa
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