Hordeum vulgare subsp. vulgare (domesticated barley): 123443520
Help
Entry
123443520 CDS
T11213
Name
(RefSeq) crossover junction endonuclease MUS81-like isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03440
Homologous recombination
hvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123443520
03460 Fanconi anemia pathway
123443520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123443520
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123443520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
HHH_8
DUF7943
Motif
Other DBs
NCBI-GeneID:
123443520
NCBI-ProteinID:
XP_044975843
LinkDB
All DBs
Position
3H:complement(204758526..204774795)
Genome browser
AA seq
532 aa
AA seq
DB search
MAPAMPKQRAVHLPDNEEVARLLLEKHRSMLETNIPDNLSLTLSNAYRNVCAAKEPIRTL
KDLLKIKGVGPWVIRLIKESFPVSTQDLSPPKCKEKGRKGKKIKRPEHNPELVCSNSASM
ASQELIQLTSQEQFSYSSEVRTDSNCSENIILSGPDSDEPFKGNNPFIGPEHFVEERDRP
KLKACSSSFLDISKGPATNFGASDCSVPVSPLSSQGTFELQSSSTMGSTEFTMLDKDTGG
MGNSILAMPPCLSNEMFLEVYEVVLILDDREIFGSVRLYLTQESLSRGKRVVDNIHSKFH
VPVEVGQTQTCIKRLPVGDCIWIARHRRSHTEYVLDFIVERKSVTDLVSSIRDSRYKDQK
LRLKKCGLRKLIYLVEGDPNPLGASESIKTACFTSEILEGFDVQRTTGYSDTERTYGHLT
LSIIDYYSMKFSIGANTSRVCLTYDEFVKKCCDPKKLTVSDIFALQLMQVPQVTEETAIA
VIELYPTLVSLARAYSMLDGDSPAQEKMLNMKSKMVNAGASRNIFKLVWGEG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggctccggcgatgccgaagcagcgcgcggtgcatctccccgacaatgaggaggttgcg
cgcctcctcctggagaagcaccggtcgatgctggaaacaaacatcccggacaacctgagc
ctcacgctctccaacgcctaccgcaacgtctgcgccgccaaggagcccatccggaccctc
aaggacctgctaaagatcaagggtgttggaccatgggtcatccgtctcataaaagagtcc
tttcccgtgtccactcaggatttatctcctccaaaatgtaaagagaaagggagaaagggg
aagaaaataaaaagaccagagcataatcctgaacttgtttgcagcaattctgcttctatg
gcatcccaagaactgatacagttgaccagtcaagagcagttcagttatagctctgaagtt
cgaactgacagcaactgttctgaaaatatcattctcagcggtccagattctgatgaacca
tttaaagggaacaatcctttcataggtcctgaacattttgttgaagagagggatcgtcca
aaactgaaagcatgcagttccagtttccttgatatcagcaaaggaccagctactaatttc
ggagcgtcagattgttcagttcctgtttcacctctttcatctcaaggaacatttgagctg
caatcttccagtacaatgggttctactgaattcactatgctagacaaggatactggtggt
atgggcaattctatactagctatgccaccttgtctatccaatgaaatgtttcttgaagtt
tatgaagtggtgttgatattggatgatcgtgaaatttttgggtccgtgagattatatctt
actcaagaatcattatcccgtggcaaaagagttgttgataacatacattcgaaatttcat
gtgcctgtagaggttggtcagactcagacttgtataaaacgcttgcctgttggagattgt
atttggattgctcgtcatagaagatctcatactgagtatgttcttgacttcattgttgaa
aggaaaagtgtcacagatttagttagctcaattagagacagcaggtacaaagatcagaaa
ttaaggctaaagaaatgtggactaagaaagctgatatatctggttgaaggtgatccaaac
cctttaggcgcatcagagagcatcaaaacagcctgcttcacaagtgagattcttgaagga
tttgatgttcaaagaaccaccgggtattctgatactgaaaggacatacggccacctgaca
ctttcgataattgattactacagcatgaaattctcaatcggtgctaacactagtcgagtt
tgcttaacttatgacgagtttgtgaagaagtgttgtgaccccaagaagttaactgtgagc
gacatattcgcccttcaacttatgcaggtaccacaggtgacagaagaaaccgcaattgca
gttatagagctctacccgacacttgtctcacttgctcgggcatactccatgcttgatggc
gatagccctgcccaagagaagatgctgaacatgaagagcaagatggtgaacgcaggggct
agcagaaatatcttcaagcttgtctggggtgaagggtga
DBGET
integrated database retrieval system
