Hordeum vulgare subsp. vulgare (domesticated barley): 123443792
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Entry
123443792 CDS
T11213
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic-like
KO
K02945
small subunit ribosomal protein S1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
123443792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hvg03011
]
123443792
Ribosome [BR:
hvg03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
123443792
Bacteria
123443792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Motif
Other DBs
NCBI-GeneID:
123443792
NCBI-ProteinID:
XP_044976258
UniProt:
F2DBC8
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Position
3H:338599236..338616876
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AA seq
426 aa
AA seq
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MLPPSCRLLPLISPPPPHSLHVAKALIPRQTHALARARARSVAPTMSAQLDAALSAGFVR
LLNAGQEDAYRGGGHYDPKSGDYAVGIVVSGTEARLDVAVGADRLATLLTKELLPLCRAE
FPTGGVKPVPPRPGSVGVLEASPMDEETQNQKRGARTLVPPGTVVFAEVLGRTLSGRPLL
SARRLFRRLSWHRARQIMQLDEPIEVKIYEWNTGGLLTRIEGLRAFLPKFELMDRISTFT
DLKNNVSRCIRVCIIRLDEETNDLIVSEKKAWEMTYLKEGALLKGNVHKIFPYGAQIRIT
GTNRSGLLHISNISQGRVLSVSDILKVDDELKVLVIKSNVSDKIALSIADLESAPGLFLS
DKEKVFSEAEEMSKRYREQLPVVSRNTKLDYDLPGGTIPFDNEAMLYANWKWFKFLRHAK
FADENE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgccgtcttgccgcctgctccctctcatctcgccgcctcctccgcactccctg
cacgtcgccaaagctctcatacccaggcagacccatgccttggcccgggcccgggcccga
tccgttgcccccaccatgtctgctcagctagatgccgccctttctgccggcttcgtccgt
ctcctcaacgccggccaggaggacgcgtaccgcggcggcgggcactacgacccgaagtcg
ggggactacgccgtcgggatcgttgtctctggcaccgaggctcgcctcgacgtcgccgtt
ggcgctgaccgcctcgctacgctcctcactaaggagctcctcccgctttgccgcgccgag
ttccccactggaggtgttaaaccggttccgcctcggccagggagcgtgggcgtcttggag
gcctcccccatggatgaagagacccaaaatcagaagcgcggggccaggacgctggtgccg
cccggcacggtggtcttcgcggaggtgctcgggcgcacactgagcgggcggccgctgctg
tcggcgaggcggctcttccgacgcctctcgtggcaccgggcaaggcagattatgcaactt
gacgagccaattgaggttaaaatttacgagtggaatactggtggactacttacaagaatt
gagggtttgagagcattccttcccaaatttgagctcatggacaggataagtacgtttaca
gacttgaaaaataatgttagtcgctgcatacgtgtgtgcattataaggctagacgaagaa
acgaatgacctcatagttagcgagaagaaagcatgggaaatgacatatcttaaagaagga
gctcttctaaaagggaatgtacacaagatttttccatatggtgcgcaaattaggataact
gggaccaacagaagtggattactgcacatctccaacattagtcaaggccgtgtcttgtca
gtaagtgacatcctaaaagtagatgatgagctgaaagttctggtgatcaagtcaaatgtt
tctgacaaaattgcactcagcatagcagacctggaaagtgctcctggtttatttctgtca
gataaagagaaggtgttttcagaagctgaggaaatgtcaaagaggtaccgggagcaactt
ccagttgtctctcggaacactaaattagattatgaccttccaggggggactattccgttt
gataatgaagcgatgctttatgcaaactggaaatggttcaaatttctgagacatgccaaa
tttgctgacgaaaatgagtag
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