KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123443873
Entry
123443873         CDS       T11213                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123443873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hvg03019]
    123443873
   03041 Spliceosome [BR:hvg03041]
    123443873
Messenger RNA biogenesis [BR:hvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     123443873
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123443873
Spliceosome [BR:hvg03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    123443873
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 123443873
NCBI-ProteinID: XP_044976348
UniProt: M0VXR8
LinkDB
Position
3H:complement(363582115..363586074)
AA seq 441 aa
MDPFSKKRKPDENGAVAASPAVGAAALGLTRDDVLRLLDPLSRDQLADIAAAAALASGVA
LDAVRAAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSKGYGF
VTFRHADSALLALKEPSKKIDARVTVTQLAAAGAAGGPSGGTTGAGGIPSADVSLRKIFV
GNVPADMPSERLLAHFASYGEIEEGPLGFDKLTGKFRGFALFVYKTPEGAQASLVDSTKV
IDGQQLLCKLAIEGKKGKQQPQQSGPAGQQQPQMLQGGPPDMPGSGLGLGGPQMGGQYGG
PGNGMPSFGAFGGPNPYGNMPSSMGGSGGAGLGPMGNQMPSGMGSAGAGAFGGGGGLGGG
SFGGSSQFGAAGMGPYGGLGMGGPSSLYRMQQGSGGLPSGYGEGGNYPLPGSGFRGQDPQ
GMSPGPGGRAPPMYPNVPPYF
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggatcccttctcgaagaagcgcaagccggacgagaacggcgcggtcgccgcctccccc
gccgtcggtgctgccgcgctcgggctcacgcgcgatgacgtcctgcgtctcctcgacccg
ctgtcccgcgaccagctcgccgatatcgccgccgccgcggcgctcgcctccggggttgcg
ctcgatgccgtgcgcgccgccgccgaccgcgacccggccctgcgcaagctcttcgtccgg
ggcctcggctgggagaccaactccgactcgctccgcgccatcttctccgcctacggcgac
ctcgaggaggccgtggtcatcagcgacaagaccaccggccgctccaagggctacggattc
gttaccttccgccacgcagactccgcgctcctcgctcttaaggaaccatccaagaagatc
gacgcccgcgtgaccgtcactcaactcgcggccgctggcgctgccggtggaccgtccggt
ggaactactggcgcaggtggcatcccttcagcagacgtctcactccgcaagatctttgtt
gggaacgttcccgctgacatgccatcagagcgcctcctcgcgcactttgcttcctatgga
gagattgaagaggggccgcttggattcgacaagctgacgggcaagtttaggggctttgcg
ctctttgtgtacaagacacctgagggggcgcaggcctcactagtggactcaactaaggta
atcgatgggcaacagctcttgtgcaagctagccatcgaggggaagaaggggaagcagcaa
ccgcagcaatctgggcctgccgggcaacagcaaccacagatgctccagggtggcccgccg
gacatgcctggttctgggcttgggctaggaggacctcagatgggtgggcagtatggtggc
cctgggaatggtatgccatcgtttggtgcatttgggggtcccaacccatatggtaacatg
ccatcgtccatgggtggcagtggtggagctggtttgggcccaatgggaaatcagatgcct
tccgggatgggttctgctggggctggtgcatttggcggcggtggcggactgggtggtggt
tcattcgggggctcatctcaatttggtgctgctggtatggggccttatggtggtctaggc
atgggcggaccttcctcactataccgtatgcaacagggctcaggtgggctgccctcaggc
tatggcgagggtggaaactatcctcttccagggtctggtttccggggtcaggatcctcaa
gggatgtcaccaggaccaggtggcagggctcctccaatgtaccccaatgtgccaccttat
ttctaa

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