Hordeum vulgare subsp. vulgare (domesticated barley): 123444002
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Entry
123444002 CDS
T11213
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00061
Fatty acid biosynthesis
hvg00071
Fatty acid degradation
hvg01100
Metabolic pathways
hvg01212
Fatty acid metabolism
hvg04146
Peroxisome
Module
hvg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
123444002
00071 Fatty acid degradation
123444002
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123444002
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hvg01004
]
123444002
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123444002
Enzymes [BR:
hvg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
123444002
Lipid biosynthesis proteins [BR:
hvg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
123444002
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of breast milk
123444002
Exosomal proteins of breast cancer cells
123444002
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
123444002
NCBI-ProteinID:
XP_044976532
UniProt:
A0A8I6XV73
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Position
3H:405590029..405598729
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AA seq
658 aa
AA seq
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MAEMQHVVKVEEGRPAADGRPSVGPAYRSAFARDGFPAPVPGLDSCYDIFRMAVEKYPNN
RMLGHREIVDGKAGAYVWRTYKEVFGIANKIGNSIRSCGLTKGSRCGIYGANSPEWIITM
EACNAHGIYCVPLYDTLGAGAIEFILCHAEVEIAFAEEKKVAELLKTFPKSTEFLKTIVS
FGKVTQEQKEEVSKYGLSIYSWDEFLSLAGDQEFDLPVNQRTDICTIMYTSGTTGDPKGV
LISNASIICLIAGVDRLLNSVNERLEETDVYMSYLPLAHIFDRVVEELFMFHGASIGFWR
GDVKLLVEDIGTLKPTILCAVPRVLDRIFSGLQAKISSGGFIKSTMFNLAYKFKQFRMMR
GAKHNEAAAICDKVVFSKVKEGLGGNVRVILSGAAPLATHVEEYLRVVTCAHVLQGYGLT
ETCAGSFVSLPNQMSMIGTVGPPVPNIDARLESVPDMNYDALASTPRGEICIKGETLFSG
YYRREDLTEEVLVDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENIYGV
VSAIDSIWVYGNSFESFLVAVVNPNKEALESWAEGNGISGDFEALCENPKAKEYILGELS
KTGKEKKLKGFEMIRAVHLDPVPFDMERDLITPTYKRKRPQLLKYYQGAIDNMYKSAK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatgcagcacgtggtgaaggtagaggagggccgcccggccgccgacggccgg
ccctcggtggggcccgcctaccggagcgccttcgcccgcgacggcttcccggcgcccgtc
cccggcctggacagctgctacgacatcttccgaatggcagtggagaagtatccaaacaac
agaatgcttggtcaccgtgagattgttgatgggaaggctggtgcatacgtctggaggaca
tataaggaggtgtttggcattgcaaataaaatcggtaactctattaggagctgtggactc
accaagggcagtcgttgcggtatatatggtgccaatagccctgaatggattatcacgatg
gaggcttgcaatgcgcatggaatctactgtgttccattatatgacactcttggggctggt
gcgatagagtttattttgtgccatgcagaagttgagattgcttttgcagaggaaaagaaa
gttgcagagctgttgaagacatttcctaagtcaactgagttcttgaaaaccattgtgagt
tttggtaaagtgacacaagaacaaaaggaagaagtttccaagtacgggctgtcaatatac
tcatgggatgagttcctttctttggcaggtgaccaagaatttgaccttccagtgaatcaa
aggacagatatatgcactataatgtatactagtggaactactggtgaccccaaaggtgta
ttgatctccaatgcgagcattatctgtctcattgcaggtgtggataggcttcttaactct
gtaaacgagcggctggaggaaacagacgtttatatgtcttaccttcctcttgctcatatc
tttgaccgagttgtggaagagctgtttatgttccatggtgcatctattggattttggcgt
ggggatgttaagttactggttgaggatattgggacactgaaaccaactatcttatgtgct
gtcccacgtgttcttgatcggatattttctgggcttcaagctaaaatctcatctggtggt
ttcataaagagtacaatgttcaatcttgcttacaaattcaagcagtttagaatgatgagg
ggagctaagcacaatgaagctgctgcaatatgtgacaaagtagttttcagtaaggtgaaa
gaaggtcttggaggaaatgtccgtgtaattttatctggagctgctccacttgccactcat
gtggaagaatacctgcgggtggtgacatgcgcacatgttttgcaaggatatggtctcacg
gaaacttgtgctggatcatttgtctcactaccaaatcagatgtccatgatagggactgtt
ggtcctccagtgccaaatattgatgcccgtctagaatctgtccctgacatgaattatgat
gcactcgcaagcacacctcgtggagaaatctgcatcaaaggagaaacattattctcaggg
tactacaggcgtgaagaccttacagaggaagttttggttgatggatggttccatactgga
gacattggtgagtggcaacctgatggaagtatgaaaatcatagaccgcaaaaagaatatc
ttcaagctttcacaaggagaatatgtagcagttgaaaatttggagaacatttacggtgtt
gtttctgctatagactcgatatgggtatatggaaatagtttcgagtcattccttgttgcc
gtagtcaatcctaacaaggaagctcttgagagctgggctgagggaaacggaatcagtggt
gattttgaggcactgtgtgagaatccgaaagcaaaagaatatattttgggtgaactttca
aaaacaggaaaagagaagaagctcaaaggttttgaaatgataagagctgtacatcttgac
ccagtgccgtttgacatggaacgcgacttgatcactccaacatataaaaggaagcggccc
cagttgctcaagtactaccagggtgcaattgacaacatgtacaaaagtgctaaatga
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