Hordeum vulgare subsp. vulgare (domesticated barley): 123444110
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Entry
123444110 CDS
T11213
Name
(RefSeq) YTH domain-containing protein ECT3
KO
K20102
YTH domain-containing family protein
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123444110
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123444110
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GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
123444110
NCBI-ProteinID:
XP_044976661
UniProt:
A0A8I6X8V9
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All DBs
Position
3H:431339057..431345032
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AA seq
670 aa
AA seq
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MEPKPKPALTHKPIEEAVENLKIDASTKASNGNLRAAKDASSSDAISCISSADAASTAAK
DTELNQGTYMGDQGMYYYGYYYPGSFGGWDENSYYAGSNGLEMHPTAVHAENGSYLCYVP
GYENGYTAYSQVVPGTGVDGQFVSKEPYYSAVIPVQDPSTPGMYAQPIAYGPELVPAYTW
DPSYVLMDGVQGHPVGVHQTSYPTRSNYPSNKHAVPSSKASRSTKYALGTTKGSSSAVDT
VPTSANNYPSSKFANKASGASITKGHLPSSKFVAHTNQGKGSLYQSKGTNLNESGRNCNG
GEKLKARSKLNEFGDCDRSDKHNDHSKNNLSPGADRFGLSGVQEVNDVIPSLVAVSRDSY
NLPDFVTKYEQALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDNAYKIAQERMAGKGT
KCPVFLFFSVNASGQFCGVAEMLGPVDFNKSMNFWQQDKWNGFFPVKWHIIKDVPNPQFR
HIILENNENKPVTNSRDTQEVKFLQGGEMLNIFKNFSCKTSILDDFDFYENRQKVMQDRR
GKPLATSLDHLTPKDEKPAELEKQAQAASTIEHHIAKRIEEQSKDVTADVDTAKRGQDQS
NVDAADAKTIEQSKVVATDVDTAKRSEESNGVAADLDVSKGSEEQSNKVAVELDTAKRSE
EQTSSVATAG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaagccaaagcccgcgctcacccacaagcctatagaagaggcagtagagaac
ttgaagattgatgctagcacgaaggcaagcaacggcaacttgcgtgctgcaaaagacgca
agttcttcggatgcaatatcatgcatttcctcagcagatgcagctagtactgctgccaag
gacactgaattgaaccaaggaacttatatgggggaccaagggatgtattactacgggtac
tattatccaggctcatttggaggatgggatgagaatagctactatgctggatcgaatgga
ctggagatgcacccgacagcggttcatgctgagaatgggtcttatttgtgttatgttccg
ggttacgaaaatggatatactgcttatagtcaagttgttcctggaactggcgtggatggt
cagtttgtcagcaaagagccatattactccgctgtgattcccgtgcaggacccttctaca
cctggcatgtatgctcaaccaattgcttatggacctgaactagtccctgcatacacatgg
gacccttcttatgttcttatggatggggttcagggacatcctgttggtgtgcaccaaacg
agctaccctacaagatcaaactacccttctaataagcatgctgttccatcttcaaaagct
tcacgcagcacaaagtatgcattgggtaccaccaaaggatcatcatcagctgtagacaca
gtgccaacctctgccaataactatccatcatcaaagtttgcaaataaggcatctggtgct
tccataacgaaagggcatcttccgtctagcaagtttgtggcgcatactaaccaaggaaaa
ggaagcctttatcaaagtaaaggcactaatttgaatgaaagtggtagaaactgcaatggt
ggtgagaagctgaaggccagaagcaagctaaatgaatttggtgactgtgatagatcagat
aaacacaatgatcattcaaaaaacaatttgagcccaggagcagatcgttttgggttgtcg
ggtgtacaggaggttaatgatgtcataccttcacttgttgcagtaagcagagattcatat
aatcttcctgattttgttacgaagtatgagcaagctttgttcttcgtgattaaatcttat
agtgaagatgatattcacaagagtatcaagtacaatgtttgggcaagtactcctaatgga
aataaaaggcttgacaatgcctataaaattgcacaagaaagaatggcaggaaaaggaacc
aaatgccctgttttcctcttcttttctgttaatgctagtggtcagttctgtggtgtggct
gagatgcttggcccagtagatttcaacaagagtatgaacttctggcaacaggacaagtgg
aatggattcttcccagtaaaatggcacattatcaaggatgtgcctaatcctcaatttcga
cacataatattggagaataatgagaacaagcctgttacaaacagcagggacactcaagag
gtgaagtttctgcaaggtggagaaatgctgaacattttcaagaacttctcatgtaaaacg
tcaatattggatgactttgacttctatgagaataggcagaaagtaatgcaggacagaaga
ggcaagccgctcgctacatcattggatcacctcacgccaaaggatgagaaacctgcagag
cttgaaaagcaggctcaagctgcaagtaccatagagcatcatattgccaagagaattgag
gagcagagcaaggatgttacagcagatgttgatacagccaagagaggtcaggatcagagc
aacgtggatgcagcagatgccaagacaattgagcagagcaaagtggttgcaacagatgtt
gacacagccaagagaagcgaggagagcaatggtgttgcagcagacctggatgtgtccaaa
ggaagcgaggaacagagcaacaaggtcgccgtggagcttgatacggccaagagaagcgag
gagcagacgagcagcgttgctacggcaggctga
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