KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123444266
Entry
123444266         CDS       T11213                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04144  Endocytosis
hvg04145  Phagosome
hvg04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    123444266
   04145 Phagosome
    123444266
   04148 Efferocytosis
    123444266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hvg04131]
    123444266
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hvg04147]
    123444266
   04031 GTP-binding proteins [BR:hvg04031]
    123444266
Membrane trafficking [BR:hvg04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    123444266
Exosome [BR:hvg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123444266
  Exosomal proteins of other body fluids (saliva and urine)
   123444266
  Exosomal proteins of colorectal cancer cells
   123444266
  Exosomal proteins of bladder cancer cells
   123444266
GTP-binding proteins [BR:hvg04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    123444266
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU ATP_bind_1 RsgA_GTPase AAA_16 Septin nSTAND3 cobW AAA_7 AAA_22 NTPase_1 G-alpha DAP3 PduV-EutP AAA_5 AAA_24 Sigma54_activat ATPase_2 NACHT MCM nSTAND1
Other DBs
NCBI-GeneID: 123444266
NCBI-ProteinID: XP_044976878
UniProt: F2DWU3
LinkDB
Position
3H:complement(462045141..462048777)
AA seq 206 aa
MSTSRRRTLLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEVLIEDRLVTL
QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVNKSFDTLNTWHDEFLNQASPSDPKTFP
FILLGNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYYETSAKEDYNVDEAFLSVAKLALEH
ERDQDIYFQTVADPVPETEQRGGCAC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgtcgacctcgcgcaggcggaccctcctcaaggtcatcgtcctcggcgacagcggggtc
gggaagacgtcgctgatgaaccaatatgttcacaacaagtttagccagcagtacaaagct
accattggtgcggatttcgtcaccaaggaggtcctcattgaagacaggcttgtcacattg
cagatctgggacaccgcggggcaggagagattccagagtcttggtgtcgcattctacaga
ggggcagattgttgtgtgcttgtttatgatgtcaatgttaacaagtcatttgatacgctc
aacacatggcatgatgagttcctcaaccaggctagcccatcagatcccaaaacattccca
ttcatcctacttgggaacaagattgacgtagatggtggcaaaagcagagtggtttctgag
aaaaaagctatggagtggtgttcttcaaaaggcaatattccttattatgaaacttctgca
aaagaagactacaacgtcgatgaagcatttttgtctgttgcaaagcttgctctagagcat
gagcgtgaccaggacatctacttccaaacagtcgcagatcctgtccccgagactgaacag
agaggcgggtgtgcatgctag

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