Hordeum vulgare subsp. vulgare (domesticated barley): 123444413
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Entry
123444413 CDS
T11213
Name
(RefSeq) uncharacterized protein LOC123444413 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123444413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123444413
04121 Ubiquitin system [BR:
hvg04121
]
123444413
03036 Chromosome and associated proteins [BR:
hvg03036
]
123444413
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123444413
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
123444413
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
123444413
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
123444413
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
123444413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-HC5HC2H_2
BRCT_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
123444413
NCBI-ProteinID:
XP_044977052
UniProt:
A0A8I6WKX5
LinkDB
All DBs
Position
1H:450099855..450113498
Genome browser
AA seq
699 aa
AA seq
DB search
MVSMGTSTGSRSGAVVWREIASSQPPGFGRPTGSVGGTASRSERPSPAQGLAAARPSSTH
SGGTKSATRTDMLVGIGMEADCDNLEVPRHVGNERASPAKGRKRKFFIDTTKGASPGVNA
SNTGQHLRSCRKGKGPGKHAKLEDNKGATRLGRDQTPIGLFEDECVFCHSFRTSEPWHGP
MVVYHNRRIVPSDEGIPTNAVYVHERCMVWAPEVESNGDTFKNVENEINRAKRLRCSRCK
LRGAALGCYDNSCRKTYHVPCAMMILECRWDVENFRVWCPKHAARDEKRPPTMESDTPSL
VLQNHSSQCPAKEISVDCQMEDEHINPLPGDEMSSPLLESDTTSAVLQNHSSQCPTKEIL
VECQVEDEHINPLPSGEVSSLTMESDTLSPVLRNQYLVKGGTSVLHRREDLQVDQLNTSS
SSLPQGVFHGYRQCSDKERISANYRREEKLVNQSSTPVDQWVLLGVSLSVSEKDSLKEFA
SLTSSILAEAWDRNVTHVIVGRNAGDACGKSYEVLMAILSGKWIVTVRWIMDCLVEPIPD
VKTCLEKLVPGPEISYEVNFCDGSRTSGYGPTKGRARAAERAPKLFSGLHFCLSAYMDPE
DRETIRRLVAAGGGQVLEGISPDRLHENLNRNPAEVYFIYDSSPPRKITKDFDLILGKEI
QESIEYAKSGAHVISHTKLHDAILYYDARILERRLHEDM
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgatggggaccagcaccgggagccggagcggagcggtcgtgtggagggagata
gcgtcgtcacagccgccgggattcggccggccgacggggagcgtgggcggaacagcctcg
cggagcgagagaccgtcgccggcccagggactcgccgccgcgcgtccgtcctcgacacat
tccggaggtaccaagtctgctactcgtactgacatgttggtcggcataggaatggaagct
gactgtgataatcttgaggttccacgacatgttgggaatgaacgtgcatcccctgcgaaa
ggccgaaagaggaaattttttattgatacaacgaaaggtgcatcaccaggtgttaatgca
agtaacactgggcagcacctgcgttcctgcagaaaaggcaagggcccagggaaacatgca
aagttagaagacaacaaaggtgctactaggttggggagagatcagacaccaatcggttta
tttgaagatgaatgcgttttttgccattcatttagaaccagtgagccgtggcatggtcca
atggtagtctatcacaatagaaggattgtgcccagtgatgagggcatccctaccaacgcc
gtctatgtccatgagagatgcatggtttgggccccagaagtggaatccaatggtgatact
tttaagaacgtggagaatgaaatcaatcgtgctaaaagattgagatgcagcagatgcaaa
ctccggggagcagcgcttggttgttatgacaactcctgcagaaaaacatatcatgtccca
tgtgcaatgatgatactagaatgccgctgggatgttgagaatttccgtgtttggtgcccc
aagcatgcagcacgtgatgagaagcgcccaccaacaatggagagtgacactccttccctc
gtccttcaaaatcattccagccaatgtccagctaaagaaatttcggtcgattgccaaatg
gaagatgaacacattaatccattaccgggcgatgagatgagctcaccactacttgaaagt
gacactacttccgctgtccttcagaatcattccagccaatgtccaactaaagaaattttg
gtcgaatgccaagtggaagatgaacacattaatccattaccgagcggtgaggtgagctca
ctgacaatggagagtgacactctttcccccgtccttcgaaaccaatatttagttaaaggt
ggaacttctgtccttcatagaagggaagatctgcaagtagatcagctgaacacctcgagt
tcttccttgcctcagggtgtatttcatggttaccgccaatgttcggacaaagaaagaatt
tctgccaattaccggagagaagaaaagctagtaaaccagtctagcacccctgtggatcaa
tgggttttgctcggtgtatctttaagtgtgtcagaaaaggattccttgaaggaatttgca
tccttaaccagttcaatcttggctgaggcatgggacagaaatgtgactcatgttattgtg
ggcagaaatgccggtgacgcatgtggcaaatcatatgaggtcctgatggcgatactgtct
ggaaaatggattgtcacagtcagatggattatggattgcttggtggaaccgattccagat
gtaaaaacttgcttggagaagctggttcctggcccggaaatttcttacgaggtgaatttc
tgtgatggttcgcgcacatcaggttatggaccgacgaaaggaagagctagagctgctgaa
cgggcaccaaaactgttctcaggactgcatttctgcctcagcgcctacatggaccctgaa
gacagagaaaccatccgaagactcgtagcagctggtggagggcaagtactggagggaatc
agcccagaccggttgcatgagaatctgaacagaaatcccgcggaggtgtacttcatctac
gacagcagccctccaaggaagatcactaaggatttcgatcttatccttggcaaggagatt
caggagagcatcgagtatgcgaaatcgggagcacatgtgatcagccacacgaagctgcac
gacgccatcctgtactacgatgcgcggatcctggaacggaggcttcacgaagatatgtga
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