Hordeum vulgare subsp. vulgare (domesticated barley): 123444471
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Entry
123444471 CDS
T11213
Name
(RefSeq) protein TSS-like isoform X1
KO
K03255
protein TIF31
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hvg03012
]
123444471
Translation factors [BR:
hvg03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123444471
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
CLU
TPR_8
Motif
Other DBs
NCBI-GeneID:
123444471
NCBI-ProteinID:
XP_044977121
UniProt:
A0A8I6XA64
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Position
3H:complement(497288519..497311794)
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AA seq
1931 aa
AA seq
DB search
MAPKSKRGKTKGEKKKKDEKVLPVAIDITVNLPDQSDVILKGISTDKIIDVRRLLCVNTT
TCAITNYSLSHETRDGHLKDGADVVTLKPYTLTLVEGEYDEGSALVHVRRLLDIVACTAS
FGSPPPLPTPPSPKDADATKEPSNSSSKPAAAASLGGRRMGSPPPLPEESATKDADAAAA
KEDAVSAELEAEMSGACPRLGAFYEFFSLANLSPPLHFIKRVTQPRQEEQPSDDHLFFLE
AKLCNGKFVIVEARRKGFFSFGKQRVLCHNLVDLLRHLSRAFNNAYEDLMKAFLERNKFG
NFPYGYRANTWLVPPIAAQSPSTFPPLPAEDETWGGNGGGWGRDGKSDMLPWADEFMYLT
SMPCKTAEEREIRDRRAFLLHSLFVDVAIFRTIAAIRHVMESTDLSTAIKINEVLHSETV
GNFSITVTRDSSDASCKLDTKIDGSRATGMDSKHLGERNLLKGITADENTAAHDVDSLGI
VNIRYCGYVAVAKVNNYEKTSVTSSIKPADIADQPEGGAHALNINSLRMLLNEANATGEK
KLPTQSHKQEELAAAQTYAEKLLKGSLQNLEEEETDKQSFMRWELGACWVQHLQDLKKSD
KDKKQGDGKEKKKMVDKAVKETKVEGLGKPLKALKHPKNAVDASGKGSSSGNNSLTDAAS
SGENQKVKPSSVESLQGDCIASESEILLKDVLLDSAFTRLKDSETGLHQKSPSELIEMAL
KFYDEVALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMRSLGRVVKLSEKLSHVQSLCV
HEMIVRAFKHIVRSVIATTSDMRQLASTIAAVLNLLLGVPETEFSGGSPAVHPLVWRWLV
VFLQKRYQYELTEQHYVDVRKYAILRGLCHKVGIELAPRDFVMDSAFPFYNKDIISLVPV
HKQVACSSADGRQLLESSKTALDKGKLEDAVNYGTKALAKLIMVCGPYHRMTAGAYSLLA
VVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKR
ALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAA
SYHAIAIALSLMEAYSLSVQHEQTTLQILRAKLGPEDLRTQDAAAWLEYFESKVIEQQEA
ARNGTRKPDASIASKGHLSVSDLLDYINPNKEHKGRDSESGKRRYSSIKVLSHLSENSNV
ESPDISPRDSAIAIKDGGKRIEEPLQDDSAKIVDILETDVKESPLSMEASPPSEQLVERA
EVNINSPEEVFDEEQDDGWQPVQRPKTAAVLGKQINHYRPVIRRTYDPENHAPTDASQYK
PRNSYSNNRYYFLKKKSVVPAAYTDPQQHMKVQTSTARFGRKIYKAMTYRIKPGTASAEV
QDTSRITEQMVGKEESQIGHSHVHNTSADLKRSEPHGPWVESTGNPPSYKDVALARPGTI
AKAQVQKPRDDVLQPSLGQIIAQEMKDSLVDAVQVDQRSVSSSTNNSEVNIVPTEKQHSE
QRGESHMEHEINHTGKDSLPDKLTSNTEKPSGGGPADSKTDTTLFSNKDQEPTSRENFGA
ATEFSDSTVPTEAEKRGKSVIQFLEESLPTNSEPITVSAHAISMQGGVESEKSKPDLLLS
NIDIREMSNKKLSAAAPPFNPSPPAILSPPLAVSVGLPPPGAVPGVGPWPMNVSMHPGHS
NMVPNGPPLCTSPHHLYPPAPRSPNLLHPVPFLYPPYSQPQMVPSSTFPMNTTIFRPNHY
GWQPYMRPAASEFVPGPAWPNNHPVAYTPSRHVADTISQSLADTHVLSDAAVVSIGPSLD
SNMVAVKEEMEVPVEVCSGNLISNNILGEEHDKELKDAVNAAVNPHKPGDSIFDIDGANL
GGSMKNEDEGSFRIFVKGKSRRKQTLRIPISLLNKTYSARSFKLDFNRVVRENDIFRPSG
VSFAEVVSSGN
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagagcaagcgtggcaagaccaagggcgagaagaagaagaaagatgagaaa
gtgctccctgtggccattgacatcaccgtcaacctcccagatcagtccgatgtcattctc
aaggggatttccacggacaagatcatcgatgtgaggaggctgctctgcgtcaacaccacc
acatgtgcaatcacaaactattccctctcgcatgagactcgtgatggccacttgaaggat
ggcgctgatgttgtgacactgaagccatatactctcaccctggtagaaggggagtacgat
gagggtagcgcgttggtgcacgtacgacggctgctggacatcgttgcgtgcaccgcctcc
tttggctctcctccgccactgccgactcctccatcccccaaggatgccgatgccaccaag
gagccctccaactccagctccaagcctgcagcagccgcttccttgggtgggcgccgcatg
ggctcaccgccgcccctgcccgaagagtcagctacgaaggatgccgatgcagccgcggcc
aaggaggacgcagtctcagcagagctggaggcggagatgagcggtgcatgcccccgcctc
ggagcgttctacgagttcttctccctcgctaacctctcaccacccctccactttataaag
cgagtaactcaacctcgacaggaggagcaaccgtctgatgaccatctcttcttccttgag
gcaaagctttgtaatgggaaatttgtcattgttgaagctcggagaaaggggttctttagt
tttgggaaacagcgtgttttgtgccacaatcttgtcgacctattgaggcatctcagcaga
gcattcaataatgcatacgaggatcttatgaaggcatttttggaacggaacaagtttgga
aattttccttatggttatcgtgcaaatacatggcttgttcccccgattgctgcccagtca
ccatcgacatttcctcccctacctgctgaggatgaaacttggggaggcaatggaggtggt
tggggaagggatggcaaaagtgacatgttgccatgggcagatgagttcatgtatctcaca
tccatgccttgcaaaactgctgaggagagggaaattcgtgacaggagagcattcctactg
cacagtctattcgtagatgttgccatctttagaactattgcagccatccggcatgtaatg
gagagtacagatctgtcaacagcaatcaagataaatgaggtcttgcattctgagacggtg
ggaaattttagcatcactgtcacaagagattcttcagatgcaagctgcaaattggacact
aagatagatggaagccgagccacaggaatggactctaagcatcttggagagagaaacctt
ttgaaaggaataactgcagatgaaaacactgctgcacatgatgttgacagtttgggcatc
gtgaatatcagatactgtggatatgttgctgtagcaaaggttaacaattacgagaaaact
agtgtgacttcttctattaagcctgctgatatcgcggatcaacctgaagggggtgcccat
gcattgaacattaacagtttgaggatgctcctcaatgaagccaatgcaactggagaaaaa
aagttaccaacacaaagtcataagcaggaagaactagctgcagcacaaacctatgctgag
aaacttttgaagggaagtcttcaaaatcttgaggaagaggagactgataaacaatcattt
atgagatgggaacttggtgcatgttgggttcagcacttgcaagatctgaaaaaatctgac
aaagacaaaaaacaaggtgatgggaaggaaaagaagaaaatggtggacaaagctgtgaaa
gagacaaaggttgaagggcttgggaagcctctcaaagctcttaagcacccgaagaatgcg
gttgatgcttctggcaagggatcctcatcagggaacaacagtttgactgatgcagcaagc
tccggggaaaaccagaaagtcaagccatcatctgttgaatctcttcaaggtgactgcatc
gcctccgagagtgaaatcttgctgaaggatgtattactggattctgcctttacaaggttg
aaagattcagaaacaggactccaccagaagtcaccatctgagttgattgagatggctctg
aagttctatgatgaagttgcacttcctaagctggttgccgattttggttcattggaactt
tcacctgttgatggtaggaccttgacagatttcatgcatacgaggggcctacagatgcgc
tctctaggacgagttgtcaaactttcagagaagctctcacatgtacagtctctttgtgtg
catgaaatgatagtgagagcattcaagcatattgtgcgatctgtgattgcaactacttca
gacatgcgacaattagcatcaacaatagctgcagtgctgaacttacttcttggtgttccc
gaaactgaattttctggtggttctcctgctgtgcaccccttggtgtggagatggcttgtt
gttttcttgcaaaagcgataccagtatgagctcacagagcaacattatgttgatgtgagg
aaatacgctatactgagaggactatgccataaggtgggcattgaattggcaccccgagat
tttgtcatggattctgctttcccgttttacaataaggacattattagccttgtccccgta
cataagcaagttgcgtgctcatctgctgatggaaggcaacttctagaatcctccaaaacg
gctcttgacaagggtaaacttgaagatgctgttaattatggaaccaaggctcttgccaaa
ctcataatggtgtgtggtccctatcatcgaatgacggctggtgcttatagccttctagct
gttgttttgtaccacactggtgattttaatcaggctacaatatatcagcaaaaggcccta
gatatcaatgagagggaacttgggcttgatcaccctgatacgatgaagagttatggagac
cttgctgttttctactatcgtttacaacatacagaattggctctgaagtacgtcaagcgt
gcattatatcttctacatcttacatgcgggccatctcatccgaacacagctgctacatat
attaatgtagccatgatggaggaaggcttggggaatgtgcatgtagctcttaggtacttg
cacaaagctttaaaatgcaaccagagattacttgggcctgatcatatccagactgctgca
agctaccatgctatcgccattgctctctcattgatggaagcttattcgttgagtgttcag
catgagcaaacaaccctgcaaatccttcgtgcaaagcttggaccagaggatcttcggact
caggatgctgcagcctggcttgaatacttcgaatcgaaagtaatagagcaacaagaagct
gcccgcaatggaactcgaaaacccgatgcatcaatagctagtaaaggacacctaagtgta
tctgatcttcttgattacatcaatcccaacaaagaacacaaaggaagagattctgaatca
ggcaagaggaggtactcaagcataaaggttttatcacatttgagtgagaattcaaacgta
gaaagtcctgatatatctccaagagattctgctattgcaatcaaagacgggggaaaacga
attgaagagccgttgcaagatgatagtgctaagatcgtagatattcttgaaactgatgtt
aaagagagtcctttatccatggaggcttcaccaccttctgaacagctggttgagagagct
gaggtgaacatcaattcacctgaggaagtttttgacgaagaacaggatgatggttggcag
cctgttcaaagacctaaaacagctgcagttttaggaaaacagataaaccattaccgtcct
gtgatcagaaggacgtatgaccctgagaatcatgctccaacagatgcttcccaatataag
ccaaggaattcctattcaaataaccgatattacttcttaaagaagaaatctgtcgtacct
gcagcatacacagatcctcagcagcatatgaaagttcagacatcaactgcgaggtttggt
cgtaagatatacaaggctatgacctaccggattaagccagggacagcatccgcagaagtg
caagatacttctaggatcacagagcagatggttggtaaagaagaatcccaaataggtcat
tcacatgtacacaatacttcggcagatctgaaaagaagtgagccacatggaccttgggtt
gaaagtactggaaacccaccatcatacaaagatgttgcattggcacgtccaggtacaata
gccaaggctcaagtacaaaaacctagagatgatgtactgcaaccatcacttggtcaaatt
atcgcacaagaaatgaaggattccttggtagatgcagttcaagtcgaccagaggtccgtg
tcctcaagtaccaataattccgaggtaaacattgtgccaacagaaaagcagcattcagaa
caaagaggagagtcacatatggaacatgagattaaccacactgggaaagatagtttacca
gataaattaacatcaaatactgagaaaccttctggcggtggccctgcagatagtaagaca
gacacgaccttattcagtaacaaagatcaagaaccaacaagtagggagaattttggtgca
gccacagagttctcagattcaactgtacccacagaagctgaaaagagaggaaaatctgtc
atacaatttctagaagaatctctacctactaatagtgaacctattacagtttcagcgcat
gccataagtatgcagggaggtgttgaaagtgagaagtcaaagcctgacttgcttctaagt
aacattgatataagagagatgtctaataagaagctatctgccgctgcacctccattcaat
ccgtctcctccagccatccttagccccccacttgctgtaagtgtcggtctcccaccacca
ggtgccgttccaggtgtcggcccttggcctatgaatgtctccatgcatcctggacattca
aatatggtgccaaacggtcctccgctgtgcacatccccacatcatttgtacccccctgct
cctcggtctcctaacctcttgcatcctgtgccatttctttatccaccatatagtcaaccg
cagatggttccaagcagcacatttcccatgaacaccactatttttcgccctaaccattat
ggatggcaaccttacatgaggccagctgcatccgagtttgtgcctggaccagcatggcca
aacaatcatccagtcgcttacacccccagtcgacatgttgctgacactatttctcagtct
ttagcagacacacacgtcctatctgatgcagctgttgttagtataggaccttcgctggac
agcaatatggttgcagtaaaggaggaaatggaggtccctgtggaggtatgcagtggtaac
ttgatcagcaataatattttgggagaggaacatgacaaagagttaaaggatgctgttaat
gctgcagttaatcctcacaagccaggagacagcatatttgatattgatggagcgaatctg
ggaggcagcatgaagaatgaagatgagggtagcttcaggatatttgtaaaggggaaaagc
aggcgaaagcaaactctgaggatcccgataagtttgctcaacaagacatatagcgcacgt
tccttcaaacttgacttcaacagagtagtcagagagaatgacatcttcaggccatcgggc
gtttcttttgctgaagtagtttcttctggcaactga
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