Hordeum vulgare subsp. vulgare (domesticated barley): 123445020
Help
Entry
123445020 CDS
T11213
Name
(RefSeq) structural maintenance of chromosomes protein 2-1-like
KO
K06674
structural maintenance of chromosome 2
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hvg03036
]
123445020
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
123445020
Condensin II
123445020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
CCDC39
BST2
AAA_29
TPR_MLP1_2
Fez1
LacI
Motif
Other DBs
NCBI-GeneID:
123445020
NCBI-ProteinID:
XP_044977869
UniProt:
A0A287M5P6
LinkDB
All DBs
Position
3H:557105670..557114945
Genome browser
AA seq
1175 aa
AA seq
DB search
MHIKEVCLEGFKSYAGRTVVPGFDPLFNAITGLNGSGKSNILDSICFVLGITDLRAVRAA
SLQELVYKQGQAGVTKATVSIVFDNSDRARSPLGYEDSAEITVTRQIVVGGRNKYLINGH
LAQPSRVQTLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYEMKKES
ALKTLEKKQNKVEEINKLLDDEILPALEKLRKERCQYMKWANGNTELDRLKRFCIAYEFV
QAERVRESALSDVKQIQGKIVELDESTEKLKADIDEMDKNIATLTAEKEAKLGGELKVLS
EKVDKLSHALIKETSLMDNQEETLRSEEKAADKILKNIEDIKRSIVERDAAVKNAEDGAS
DMSKRAEDLTKEIDESEKEYQGVLAGKSSANEKKCLVDQLRDAKAAVGEAESGVKRLTTK
ISHSEKELKEKKAQMKSKRDEATAAEKELKARTKDLEAIKASMGSINYEEGQMETLQKDR
STEVEVVQKLKYKVRALSGELGNVNFSYQDPVKNFDRSKVKGVVAQLVKIKDSSTATALE
VAAGGRLYNVVVDTETTGKQLLQNGGLNRRVTIIPLNKIHTGTIPDRVQQAARRMVGAEN
VTLALELVGYDEEVKNAMAYVFGSTFVCRNMEAAKEIAFNREVGSTSVTLEGDIFQPSGL
LTGGSRRGGGDLLRKLHELAKAEADLSDHEDMLSVIEQKIAVLLPLHKKYAELKSQFELK
SYDLSLFQSRVEQNEHHKLGELVKKLEQELQESKEELKEKQVEHKKCVSTVSDLEKTIKT
YGSEREGRLKALEKKIKSLKSEMQAMSDQLKAYQSERERLIMEKDAVANELATLEEQLIT
SKAQITALSETWGTHKSKVAGTKLEYDQAESELNIGRSKLKECDSQINSISKEQQKLQQL
LGDSNVERKKMENEVKRMEIEQKDCSSRVDKLMEKYSWIATEKQLFGKSGTDYDFASCEP
HKAREELDNLQTQQSGLEKRVNKKVMAMFEKAEDEYNDLISKKNIIENDKSKIKKVIEEL
DEKKKETLKVTWLKVNKDFGSIFGTLLPGTMAKLDPPEGGTFLDGLEVRVAFGTVWKQSL
SELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPQSQFIV
VSLKEGMFNNANVIFRTKFVDGVSTVTRTVPSKQK
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaaggaggtctgcctggagggcttcaagtcgtacgcggggcggacggtggtg
ccggggttcgacccgctgttcaacgccatcaccgggctcaacggctccggcaagtccaac
atcctcgactccatctgcttcgtgctcggcatcaccgacctccgcgccgtgcgcgccgcc
tcgctccaggagctcgtctacaagcagggccaggccggcgtcaccaaggccaccgtctcc
atcgtcttcgacaactccgaccgcgcccgctccccgctcggctacgaggactcggcggag
atcaccgtcacgcgccagattgtagttggtggacggaacaaataccttataaatggccat
cttgcacagccttcccgggtgcagactcttttccactccgtgcagcttaacgtgaacaat
ccccattttctaattatgcaagggcgtattacgaaagtgctgaacatgaagcctccagaa
attctttccatgttggaagaggcagcaggcacaaggatgtatgaaatgaagaaggaatct
gctcttaaaacacttgagaagaagcagaataaagtcgaggagatcaataaacttcttgat
gatgaaatccttcctgcattagagaaacttagaaaagagaggtgccagtacatgaaatgg
gccaatggtaacactgaactagatcgacttaaaagattctgtattgcatatgagtttgtt
caagctgagagagtgcgagaaagtgcactcagtgatgtcaaacaaatccagggaaagatt
gttgaactggatgaaagcacagaaaagctaaaagcagacatagatgaaatggacaaaaac
atagctaccttaactgctgaaaaagaagccaaactaggcggtgagttgaaggttttgtca
gagaaagtggataagctctcgcatgcacttattaaggaaacttctctgatggataatcaa
gaggaaactctaaggtcagaggaaaaggctgctgataagatcctgaagaacattgaggac
atcaagagatctattgttgagagagatgcagctgtaaaaaatgcagaggacggtgcatct
gatatgagtaagagagcagaggatctgacgaaggagatagatgagagcgagaaagaatat
cagggcgtgctagcaggaaaaagcagtgcaaatgagaagaaatgcctagtagatcaactt
agagatgcaaaagctgctgttggagaggcagaatctggagtaaagcggttgacgaccaaa
ataagccattccgagaaggagctgaaagagaagaaagctcagatgaaatccaagcgtgat
gaagctactgcagctgagaaagagctgaaagctaggacaaaggatttggaagctatcaag
gcatccatggggtctataaattacgaagagggccagatggaaactctgcaaaaggatcga
tcgacagaggtagaggtggttcagaaattgaagtataaagttcgcgcactttctggtgag
ctggggaatgttaacttcagctatcaagatcctgttaaaaattttgatagatcaaaagtc
aaaggagtagttgcacagcttgtgaagataaaggatagctccacagcaacagcattggag
gttgctgctggaggcaggctatataatgtggtagttgacacagaaaccacaggaaagcag
ctcctacaaaacggagggctcaataggagggtaaccataataccgttgaataaaatccat
acaggtactatacctgatagagtccagcaggcggctcgtagaatggttggagctgaaaat
gtaacattagctctagaattggttggctatgacgaagaagtaaagaatgctatggcttat
gtctttggctcgacatttgtatgtcgaaacatggaggcagcaaaggagattgcctttaat
agggaagttggcagtacaagtgtgactcttgaaggtgacattttccagcctagtgggtta
ttgaccggaggtagtcgcagaggtggcggggacttgctaaggaaactccatgaattggct
aaagctgaggccgatctctctgaccatgaggacatgctctctgttattgaacagaagatc
gctgtgctcctgcctctgcataaaaagtacgctgagttgaaatctcagtttgaactcaaa
tcatatgatctgtcattatttcaaagcagagttgaacaaaatgaacatcacaagttaggt
gaacttgtgaagaaacttgagcaagaactccaggaatcaaaagaagaattgaaggaaaaa
caggtggagcataaaaaatgtgtctccactgtttctgatttggaaaagacaattaagact
tatggcagtgaacgtgaaggtaggctcaaagctctagaaaaaaagataaagtcattgaaa
tcggaaatgcaggccatgtcggatcaattaaaggcttatcaaagcgagagggagagactt
attatggagaaagatgcagttgctaatgaacttgctacgcttgaagagcaattgataact
tcgaaagcccagattactgcactgtctgaaacctggggcacacataagagcaaggttgct
ggcacgaagctagagtatgaccaagctgaatctgagctcaatattggtcgctccaaactg
aaagaatgtgactcacaaataaacagcatctccaaggagcagcaaaaacttcagcagcta
ctaggtgattcgaacgtcgaaaggaagaaaatggaaaacgaggttaagaggatggagata
gagcagaaggattgctcttcaagggttgataagctaatggagaagtacagttggattgca
actgagaaacagttgtttggaaaaagtggtacagattatgactttgcatcgtgtgaacca
cacaaggcacgggaagaacttgataatctccaaactcagcaatccggtcttgagaagagg
gtcaataagaaagttatggcaatgtttgagaaggcagaggatgaatataatgatttgata
tcgaagaaaaatattatcgagaatgacaagtcaaaaatcaagaaagtgatagaagagttg
gatgagaagaagaaagagaccttgaaagttacatggctcaaagttaacaaggattttggg
tctatattcggtactcttctacctggtacaatggcaaagcttgatcctcctgaaggtggt
accttcttggatggtcttgaagttcgggtggcatttggaacagtctggaagcaatctttg
tctgaacttagtggaggacagcggtcccttcttgctcttagtcttattctggcgttactt
ctttttaagcctgcgccgctttacatattagatgaggttgatgctgcccttgatctgagc
catacccaaaacattggtagaatgataaaggcgcattttccacagtcccagttcattgtt
gtgtcgctaaaagagggtatgttcaacaacgccaacgtgatattccgaacgaaatttgtg
gatggggtgtccactgtgacacgaacagtcccttcgaaacagaaatga
DBGET
integrated database retrieval system
