Hordeum vulgare subsp. vulgare (domesticated barley): 123445102
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Entry
123445102 CDS
T11213
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial-like
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hvg03110
]
123445102
Chaperones and folding catalysts [BR:
hvg03110
]
Heat shock proteins
HSP100
123445102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
MCM
AAA_22
Mg_chelatase
RuvB_N
AAA_7
Sigma54_activat
Sigma54_activ_2
AAA_16
AAA_14
ABC_tran
IstB_IS21
AAA_18
T2SSE
DEAD
AAA_28
nSTAND3
AAA_3
AAA_29
TsaE
ResIII
AAA_24
RNA_helicase
Terminase_6N
KH_SLS1_1
NACHT
AAA_8
Motif
Other DBs
NCBI-GeneID:
123445102
NCBI-ProteinID:
XP_044977969
UniProt:
F2DFV6
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All DBs
Position
3H:562964774..562970108
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AA seq
619 aa
AA seq
DB search
MLRTISKLREAAAPLASAAVRRCSGGPRIHADANCPRCTANISVQFSLQPLPPPAASCSA
EAAGARPHHHDGASVCPACRGAFLFRAHRIDPMRGAFLEIPSGVGADDGEDAHRGDLSRI
KRWIAERPPDDWTQMPPQAPPMQMPQVPPTRRKQGRRRGRDEGGGGGGGNGNGGDSSGGE
GTSAAPKREWWGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRVYNATV
QKGSADNSGCPDAANDDHDNVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATS
LTQAGYVGEDVESILQKLLVEAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGV
QQALLKILEGTVVTIPEKGSRKNSRNDSIQIDTKDILFICGGAFVDLEKTISERRQDSSI
GFGAPIRTNIRSSGVTSPTVTSSLLESVESGDLAKFGLIPEFIGRLPILVSLAALNEDQL
VQVLTEPKNSLSRQYRKMFSLNNVKLHFTDGALRIVAKKAIVKNTGARGLRVILETILLE
AMYEIPDEKAGNERVDAVVVDEEAIGSVDRPGCGAKILRGDGALAQYIIRNNLPNSPETN
EALAGELEDAYMLSRIVSL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgctccggaccatctccaagctccgggaggcggcggcgccgctcgcctccgccgccgta
cggcgatgctccggcgggccgcggatccacgccgacgccaattgcccgcgctgcaccgcc
aacatctccgtccagttctccctgcagcccctcccgccgcccgcggcctcctgcagcgcc
gaggccgcgggcgcccgcccgcaccaccacgacggggccagcgtctgccccgcgtgccgt
ggggccttcctgttccgcgcccatcggatcgaccccatgcggggcgcgttcctcgagatc
cccagcggcgtcggggccgacgacggcgaggatgcgcacaggggcgacctctctcggatc
aagcggtggattgcggagcgccctccggacgactggactcagatgccgccgcaggctccc
ccgatgcagatgccgcaggtccccccaacgcgacgtaaacaggggaggagaagagggagg
gatgaaggaggcggtggcggtggcggcaacggtaatggaggggactcctcgggcggggag
ggaacgagcgcggcgcccaagagggagtggtggggaggcgccaccctgggggaggaactc
ccgacgccgcgggagatgtgccggagactcgacgagttcgtcatcgggcagggcaaggct
aaaaaggttctatcagtagccgtatacaaccactacaagagagtatataacgcaactgta
cagaaaggatctgcggacaattctgggtgtccagacgctgcaaatgatgatcacgataat
gtagagatagataaaagcaatgtacttctgatgggtccaacaggctcaggaaaaacattg
cttgcaaaaacattagcacgcattgtaaatgtaccattcgttatagctgatgcgacatca
ttaacacaggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtg
gaggccgaatataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagat
aaaataacaaagaaggcagagagtgcaaacgttagtagagatgtatctggtgaaggtgtt
caacaggctttgttaaaaatcctagaaggaactgttgtcaccattcctgaaaagggatct
cgcaaaaattctcgcaatgacagtatacagatagacacaaaagacattcttttcatatgt
ggtggtgcttttgttgatttggagaagactatttctgaaagacgacaagattcatctata
ggatttggggcacccattcgtacaaacataagaagttcaggagtgaccagtccaacggtc
acatcatctttgttagaatctgttgagagtggagatcttgcaaagttcggcctaatacca
gagttcattggacgcttgcccattctagttagtttggcagctctcaacgaagatcagctt
gttcaggttcttacagaaccaaaaaattcactttcgagacaatacaggaaaatgtttagc
ctgaacaatgttaagctacacttcactgatggtgcactgagaatagtagcaaagaaggcc
atagtcaaaaacactggtgcacgtggtctaagagtcatcttagagaccattctactggag
gccatgtatgagatccctgatgagaaagccggaaacgagcgagtagatgctgttgtggtg
gatgaggaggccattggttccgttgacaggcccgggtgcggggctaaaattcttcggggg
gacggcgcactggcacagtacataataagaaataacttaccaaactcaccggaaaccaac
gaggctttggccggggagcttgaagacgcgtacatgctgtcaagaatcgttagcttgtga
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