Hordeum vulgare subsp. vulgare (domesticated barley): 123445169
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Entry
123445169 CDS
T11213
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00510
N-Glycan biosynthesis
hvg00513
Various types of N-glycan biosynthesis
hvg01100
Metabolic pathways
hvg04141
Protein processing in endoplasmic reticulum
Module
hvg_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
123445169
00513 Various types of N-glycan biosynthesis
123445169
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123445169
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Motif
Other DBs
NCBI-GeneID:
123445169
NCBI-ProteinID:
XP_044978053
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Position
3H:568401191..568407676
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AA seq
688 aa
AA seq
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MAWRLPPLAVLLLLVAAAVSPLSSAVRPVSDAHRSVAAELFAASPDDLETTYEAVRTFKI
LGVQRDKGLDGKACKLAAHTLSSSSSPAKDLFHAVKIAGVLGCGVDAGVYDDVASRLKAV
IKDTNSLLEFYYSVGGLLSLKEQGHSVVLSDADSTFHAIKALSQSDGRWRYDTNSAESST
FAAGIALEALAGVVSLSDAEVDPSMIGVVKNDIVKLFGTIKSYDDGTFYFDEKYVDGSEY
KGPITTSASVVRGVTSFANVVSGKLNIPGEKILGLAKFFLGIGLPGSAKDCFNQIESLSL
LENNRIFVPLILSLPSKVLSLTSKDQLKVEVTTVFGSAAPPLRVNLVQVLGSDSKVITTD
SKELQFDLDNNVHYLDITPLKIDVGKYSLVFEITLQDSEHETVYTTGGRNTEAVVVTGLI
KVDKAEIGISENDAGSAESVEKLDLLKDTKVSLSANHLQKLRLSFQLSTPLGRTFKPHQV
FLKLKHESKVEHLFVVPGSARQFKIVLDFLGLVEKFYYLSGTYDLELSVGDASMENSFLR
ALGQLDLDLPEAPEKAPRPPAQAVDPLAKFRPQKEIEHIFRVPEKRPPQEVSLAFTGLTL
LPFIGFLIGLMRLGVNLKNFPSLPGPAAFASLFHAGIGAVLLLYVLFWVKLDLFTTLKYL
SFLVVFLVFVGHRTLSHLSNTAAKQKTA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcttggaggctgccgcccctggccgtcctcctactcctcgtcgccgcggccgtctcc
cccctctcctccgccgtccgcccggtctccgacgcgcacagatccgtcgccgccgagctc
ttcgccgcctcccccgacgacttggagacgacgtacgaggcggtcaggacgttcaagata
ctcggggtgcagagggacaagggccttgacggcaaggcctgcaagctcgccgcccatacc
ctgtcctcgtcctcgtcgcccgccaaggatctgttccacgcggtcaagatcgctggcgtt
cttggatgcggcgtcgatgccggcgtttacgatgacgtcgcttcgaggcttaaggctgtg
atcaaggacaccaattcgctgctggagttctactattccgtgggagggctgctcagcctg
aaggaacaaggccacagtgttgttttgtctgatgccgatagcacattccatgcaattaag
gcacttagccaaagtgatggaagatggcgctatgacaccaacagtgctgaatccagcaca
tttgctgctggcatagcactagaagcattggcaggagttgtttcactgtctgatgcagag
gttgatccgtctatgataggagtcgttaaaaatgacatcgtgaagctatttggcacaatc
aagagctatgatgatggaaccttctattttgatgagaagtatgttgatggttctgaatac
aagggccctataacaacttctgcttcagtagtacgcggtgtcacctccttcgctaatgtt
gtttctgggaaattgaatatccctggtgagaaaatactgggcttggcaaagttctttctt
ggtattggtctcccaggtagtgcaaaggattgctttaatcagattgagtccctatcactc
ctggaaaacaataggatcttcgtccctttgatcctttcacttccttccaaagtactgtca
ctgacctccaaagaccagcttaaggttgaagtaactacagtgtttggttctgcggcacct
ccgctcagagtgaatcttgtgcaagtcttgggctctgattccaaggtcatcaccactgac
agcaaggaacttcagtttgacctcgacaacaatgttcattacttggacattactccattg
aaaatagatgttgggaagtactcgctagtttttgagattactcttcaggattcagaacat
gaaaccgtttacactactggagggagaaacactgaggctgtcgttgttacaggactgatc
aaagttgacaaggcagaaatcggaatttctgagaatgatgctgggagtgcagagtctgtt
gaaaagttagatctgctgaaagatacaaaagtttctctctctgcgaaccacctgcagaag
ttacgtctatcttttcaactatctacaccacttggacgcacatttaaacctcaccaggtt
ttcttgaagttaaagcatgaaagcaaggttgaacatttattcgtggtgccaggttctgcg
aggcaattcaaaattgttctagattttcttggattggtagagaaattttactacctttct
ggaacatatgacctcgagctttcagttggtgatgcttcaatggaaaattcgttcctacga
gccctcggccaactggatttggacttgccggaggccccagaaaaggccccacgtcctccg
gcacaagctgttgacccgttagcgaagtttaggccacagaaggagatcgaacatatattc
cgtgtgccagagaagaggccaccgcaggaagtctcacttgcatttactggcctcacactt
ctgcctttcattgggttcttgattgggctcatgcgtctgggagtcaacttgaagaacttc
ccttccctgccaggaccagcagcatttgcatcactcttccatgccggaatcggagcagta
ctattgctctatgttctcttctgggttaagctggatcttttcacaactctgaagtacctc
agcttcctcgtcgtgttccttgtgttcgtcggccataggaccctatcccatctttccaac
acggcggcaaaacagaagactgcttga
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