Hordeum vulgare subsp. vulgare (domesticated barley): 123445219
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Entry
123445219 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123445219
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123445219
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123445219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
Prok-RING_4
Zn_ribbon_6
zf-rbx1
RING_XB3-XBAT31
Zn_ribbon_FGT1_2
zf-RING_10
TerY_C
zf-RING_4
Sina_RING
zf-ANAPC11
zf-Nse
Motif
Other DBs
NCBI-GeneID:
123445219
NCBI-ProteinID:
XP_044978112
UniProt:
A0A8I6Y0Y6
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Position
3H:572564092..572568015
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AA seq
260 aa
AA seq
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MSSAGSARIPKRRRTTKASEAADRQLRERQFPDLNLLPVVEALNTGGSLSINEPVSHRQP
PPMVVSLGYETTQVVVSSAAAGSNIGMNSFPINVEVIDDDVAIYTSGPPPQARQQSSRTG
PITVIIDDDSETTAGPAGEALDEHVNTLLSLGMNPRHNPSRAQPNTDLVINIVDIPETNN
TPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASSTICGHIFCQKCIKASIQAQKKCPT
CRRKLTISNFHRVYLPMADN
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgctggttctgcaaggattccaaagaggagacgaactaccaaggcgtcggag
gctgcagaccgacaacttcgggagcgacagtttccggacctgaacttgcttccagtggtt
gaagcactcaatactgggggttcactctccattaatgagcctgtctcacacaggcagccc
cctcctatggtggttagcctgggttacgagaccacacaggttgtggtgtcatctgctgct
gcagggtcaaacattggcatgaatagtttccccatcaacgtggaagtgattgatgatgat
gttgcgatttatacctcagggccgccccctcaagcaaggcaacagtcgtccaggacagga
cctatcactgtgataatagatgatgattctgaaactactgctggaccagcaggggaagct
cttgatgagcatgtgaacactctgctgtctctgggaatgaacccgaggcacaatccctcg
agagcacaacccaacactgaccttgtaataaacatagtagacatacctgagaccaacaac
acaccgcccaaggtggcccaggctgcccctgaacctgtgaaggagatcccaaaggaaaca
aagttcagctgtccagtctgcatgaatgagctggtcaatgcatcatcgaccatctgcggc
cacatcttctgccagaagtgcatcaaggcctccatccaggctcagaagaagtgccctacc
tgccggaggaagttgaccataagcaacttccaccgggtctacctcccgatggcagataat
taa
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