Hordeum vulgare subsp. vulgare (domesticated barley): 123445280
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Entry
123445280 CDS
T11213
Name
(RefSeq) UPF0400 protein C337.03-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvg03021
]
123445280
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123445280
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
EcoEI_R_C
CTK3
TEX13
RNF6_N
Motif
Other DBs
NCBI-GeneID:
123445280
NCBI-ProteinID:
XP_044978179
UniProt:
A0A8I6XCP9
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All DBs
Position
3H:complement(578132874..578144399)
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AA seq
475 aa
AA seq
DB search
MSTGFSKEIFAQKLAKLNIAQQSIETLSHWCIFHHRCCQEVVDTWNRDFHSAPQERKISL
LYLANDIMQNSKKDGMRYIHEFLKVIAAALDDLFTNGDDFGRNVVKRLVDIWEDRKLFGT
QGQLLKEEYTHKFKELKSKKTGGELVEKVILSYKHMLRAPVDEAKLMRECNSALSFVDNL
NKEYGSSYLGSSNGYSFVEELKQQHSILRNTIEQFKMSESLRAALLSDLKEALHEQEFKT
ELVRHQLRAAQGRYRKADELCQKLGIDVPRHEPSNGSENSSLSEVPATFPPVLANANSIE
KGRSTAVRYSREGDAGEHETLNGGFSSRATRDNFERKTEEHSPGTKRQKIENGISVPQPE
SLPLPPPPPFPHPDTFEQPPPPPQYPPSPESSPPPLPPSMPPPIPPPPPSTDAFMPVPPL
PMGGMQYFPPFPPPVNYPMINMPPPFPGAPNPPHPGFLGFGGPFYGPPFPSAPHQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggattcagcaaagagatctttgcgcagaagcttgcgaagcttaatattgca
caacagagtatagagactttatcacactggtgcatcttccatcatcgttgctgccaggaa
gttgttgacacatggaatagagattttcactcagctcctcaagagagaaagatatctttg
ctgtaccttgcaaatgatattatgcagaacagtaagaaggatggcatgagatatatacat
gaattcctgaaggtcatcgctgctgccttagatgacttgttcaccaatggtgatgatttt
ggacggaatgttgtgaaaagactggttgacatatgggaagatcgcaagttgtttggcacc
caaggacaacttcttaaggaagaatacacgcacaaatttaaggagctaaagtcgaaaaaa
acaggtggagagctagtggagaaggttatattgagctataagcatatgttgcgggcacct
gtagatgaggccaagttaatgagagaatgcaacagtgctctcagctttgttgacaacctc
aacaaagagtatggaagttcgtacttagggagcagcaatggatatagctttgtggaggag
ctgaagcaacaacatagtattctgagaaacaccattgaacaattcaaaatgtctgaatca
ctcagggccgctctgctttctgatttgaaggaagcactccatgagcaggagttcaagaca
gaattagtcagacaccaacttcgggcagctcagggccgatataggaaagctgatgaactc
tgccagaagcttggaatagatgtaccaaggcacgagccatctaatgggtctgagaactcc
agtctctctgaagtgcctgctacttttcccccagttttagctaatgctaattctattgag
aagggacgatcaactgcagtgaggtattcacgggaaggagatgcaggtgagcatgagacc
ctcaacggcggcttttcttcacgagccaccagggacaactttgagcggaaaacagaagag
cactcccctggtactaagaggcagaagatagagaacggtatatctgttcctcagcctgaa
tcactcccactcccaccgccacctccattcccgcatcctgatacatttgagcagccacca
ccaccgcctcagtatcctccatcaccagagtctagcccaccaccacttccaccttcaatg
ccgcccccaatcccaccaccaccaccttctacagatgcatttatgccagttcctcctctt
ccaatgggaggaatgcaatatttcccaccttttcctccacctgtaaactatcccatgatc
aacatgccaccacctttccctggtgctccaaatcctcctcacccaggtttccttggattt
ggaggtcccttctatggcccgcctttcccctcggcaccccaccaatga
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