Hordeum vulgare subsp. vulgare (domesticated barley): 123445478
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Entry
123445478 CDS
T11213
Name
(RefSeq) crossover junction endonuclease MUS81-like isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03440
Homologous recombination
hvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123445478
03460 Fanconi anemia pathway
123445478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123445478
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123445478
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HTH_45
DUF6429
HHH_8
Motif
Other DBs
NCBI-GeneID:
123445478
NCBI-ProteinID:
XP_044978397
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Position
3H:595049934..595056998
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AA seq
571 aa
AA seq
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MAPSVPKKKRKVSLPENEEAAARIFEKHRSMAAQQPGGLPDHQARALSAAYAGVCSAKEP
VRTPADLARLKGVGDWVVDVMRDSFPGSSLDLSPPTSNTPGDTGKKGKRNKPYVPQLNSA
AYAIVITLYREMIRGTEFMKKQELIDAAEASGLSRKAIGPNNYRSKHGNSSSDFYTGWSC
MKNLTDKDLVVKKSNPAKYYLTEKGKETARICLAKSGLDDPAGPLMATGHPESVMLSDSD
SDEQEGSSPVIGSENFSEMSGLPNSKADNGRATNSPLSSRGMFGQQSFSAMGSAENSLLA
MPPRQYDESFLDTYEVVLILDDRDTFGPRARRKVVDNIHTQFDVPVEIKHLPVGDALWIA
RHKKCGMEYVLDFIVERKNVDDLLGSIKDNRYKDQKLRLKKCGLRKLIYLVEGDPNTVDG
SESVKTACFTTEVLEGFDVQRTTGYADTEKKYGHLTGSIIDYYSRNFSAGAGTSRLCLTY
VEFVKRCSDLKKVTVSDIFTLQLMQVPQVTEEAALAVTSLYPTLLSLARAYTMLVSRLFL
STYTMFFSCEAQDHTWNSDQMMAIGAPRRRC
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtcggtgccgaagaagaagcgcaaggtgagcctcccggagaacgaggaggcc
gcggccaggatcttcgagaagcaccgctccatggcggcgcagcagccgggcggcctcccg
gaccaccaggcccgcgcgctctccgccgcctacgccggcgtctgctccgccaaggagccc
gtccggacccccgccgacctggcccgtctcaagggcgttggagattgggttgttgacgtc
atgagagactcctttccagggtccagccttgatttgtctcctccgacaagcaatacacca
ggagatacgggaaagaaaggaaagcgaaacaaaccctatgtgccacagctgaattcagct
gcttacgcaatagtgatcacactctacagggaaatgataagagggacggagtttatgaag
aagcaagagcttattgatgccgctgaagccagtggtctgtcgcgaaaggcaataggccca
aacaactatagatcaaaacacgggaattcttctagtgacttttacactggatggagttgc
atgaaaaacttgacggacaaggatctcgttgtgaaaaagagtaaccctgcaaagtattac
ctaacagaaaaaggcaaagagactgctcgcatttgtctcgcaaaatctggattagacgat
cctgcaggacctttaatggcaaccggtcatcctgaaagtgttatgctcagtgattcagat
tctgatgaacaagaaggcagcagtcccgtgataggttctgagaatttttctgaaatgagt
ggacttccaaactcgaaagcagacaatggccgtgctactaattctcctctttcatctcgg
ggaatgttcggacagcaatcatttagtgcaatgggttctgctgaaaactctctactagct
atgccacctcgtcaatatgatgaaagttttctggatacttatgaagtggtgctgatattg
gatgatcgagatacttttgggccccgtgccagaagaaaagttgttgataacatacacacg
cagtttgatgtacctgtagagattaaacacttgcctgttggagatgctctttggattgct
cgccataaaaaatgtggcatggagtatgttcttgatttcattgttgaaagaaaaaatgtg
gatgatttacttggctcaattaaagacaacagatacaaagatcaaaaattaagactgaag
aaatgcgggctaaggaagcttatatatctagttgaaggggatccaaacactgtcgatgga
tcagagagcgttaaaacagcctgcttcactactgaggttcttgaaggatttgatgtccag
agaaccactgggtatgctgacactgaaaagaagtacggccacctcacgggctctataatt
gattactacagcagaaacttctctgctggtgctggcacctctcgactttgcctgacctac
gtcgagtttgtgaagaggtgttctgatcttaagaaggtcactgtgagcgatatattcacc
ctccagcttatgcaggtgccacaagtgactgaagaagctgctcttgccgtgacgagtctc
taccccactctcctctcacttgctagagcatacaccatgcttgtgagtcgtcttttcctt
tcaacttatacaatgttcttttcatgtgaagcacaggatcatacttggaattccgaccaa
atgatggcgataggcgcgcccaggaggagatgctga
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