Hordeum vulgare subsp. vulgare (domesticated barley): 123445624
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Entry
123445624 CDS
T11213
Name
(RefSeq) KH domain-containing protein At4g18375-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123445624
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
123445624
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GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
MOEP19
KH_5
Motif
Other DBs
NCBI-GeneID:
123445624
NCBI-ProteinID:
XP_044978568
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Position
3H:complement(609311338..609316311)
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AA seq
632 aa
AA seq
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MRHAGKRTTQHRDHDTQDRDQKRRPAHTQESSGMDELVVYRILCPDKAIGSVIGKGGKVI
NSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRDLKHSDIDAADDDREPVCAAQNALLK
VHDAIVGALAVNCDSDDEEANILVPASQAASIIGKSGSVIKRLRSVSKSFIKVKPKDPSD
VAHSCAMSFDNFVQITGDARAVKKALFAVSTIIYKCPSKENIPLETSIDELPPTIILPSE
LSVYPASNLYSVSDASMPSGHPSLSILGAPSHGSHVPEFTVPTDAHGGLPIYHSMVSAIP
TYNAPKCSGELLLRVACPADKIGFVIGKGGVTIRSIRKESGARVDVDDAKNDKEESIITI
TSTEATDDVKSAAVEAVLLLQAKITDENEDRMHLRLLVPANVIGCLIGKGGSIINDMRMK
SKAIIYISKGTKPQRASSNDELVEVSGEVDKLRDALVQIVLRLREDVLKDSVGRQNSGKD
GKLTVATTEPMYSSNFPMPALLPYSQQITPLRYDQRDEAERGSNVFPRSSLYHGYSPRQQ
AVDDGFGLRSSYTSKPYGRRVPDMEMFIPSSGLSKVMGKHGTNLDNIRKISGADIEIIES
KSSRHEHVAYIYGTPEQRQSAENLIKAFIMST
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatgccggtaagcgtaccacccaacacagggatcatgacacacaagacagggac
caaaagcggaggccagcccacacccaggaatcctccggtatggatgaattggttgtttac
cggatactttgtccagacaaagcgattggtagtgtgattggcaagggtggcaaggtgata
aattctatccgccaacagacgaatgccaaagtcaaggttgtcgacccttaccctggtgct
gacaaaagggttattttggtatattgttatgtcaagcatagagacctcaagcatagcgac
attgatgctgctgatgatgatagggagcctgtttgcgcagcacaaaatgcattactcaag
gtgcatgatgcaattgttggtgctctggcagttaattgtgattctgatgatgaagaagcc
aacattcttgttccagctagtcaagctgcaagtattatcggaaaatctggttctgtcatc
aagaggcttcgctcagtttcaaaatcattcattaaagttaaaccaaaagatccaagtgat
gtcgcacactcatgtgctatgagttttgataatttcgttcagataactggggatgctaga
gctgtcaagaaggcattgtttgcagtatcaacaattatctacaaatgtccgtcaaaagag
aacattccccttgaaacatccattgatgaacttcctccgaccattatacttccttcagag
ctttcggtttatccggctagtaacttatactcagtatcagatgcttctatgccatctgga
catccaagtctgtcgatcttaggggcaccaagtcatggttctcatgttcctgaatttact
gtacccactgatgctcatggtggattgcccatttatcattctatggtttcagctattcct
acttataacgccccaaaatgttcaggagagctattgctgcgtgttgcatgccctgctgac
aagatcggatttgttattggtaaaggtggggtgaccataaggagtataagaaaagagagt
ggtgcaagggtagatgttgatgatgcaaagaatgacaaggaagaaagtataatcaccatc
acatccactgaggcgaccgatgatgtaaaatctgcagcagtggaagctgttcttctgctt
caagcaaagatcactgatgaaaatgaagatagaatgcatcttcgccttcttgttccggcc
aatgtgattggctgtcttatcggcaagggtggttcaatcattaatgatatgcgtatgaag
tctaaggcaattatctacatatcaaagggcactaagccccaaagggcatcttccaatgat
gagcttgttgaggtgtccggggaagtggacaaactgcgtgatgctcttgttcagatcgtt
ctaagactccgggaagatgttctgaaggacagcgtggggaggcaaaattctggcaaggat
gggaagctaactgttgccaccactgaacccatgtattcgagcaactttccgatgccagca
ttattaccttacagtcaacaaatcactccattgcgctatgaccaaagggatgaagctgag
cgtggttcgaatgtatttcctcgtagcagcttgtatcatggatacagccccagacagcag
gctgtagatgatgggtttgggttacgctcctcatacacttcaaagccatatggaaggcgc
gtcccagatatggaaatgtttattccttctagtggcctttcaaaagtaatgggaaagcat
ggtacaaacttggacaatattagaaagatttcaggagctgacattgaaattattgaatca
aaatcatctcggcatgaacatgttgcttacatatatggcacccctgagcagaggcagtcg
gcagagaatttgattaaagctttcataatgtctacttaa
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