Hordeum vulgare subsp. vulgare (domesticated barley): 123446261
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Entry
123446261 CDS
T11213
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
123446261
Enzymes [BR:
hvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
123446261
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
Motif
Other DBs
NCBI-GeneID:
123446261
NCBI-ProteinID:
XP_044978869
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Position
4H:complement(146143430..146148606)
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AA seq
686 aa
AA seq
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MAPMAAVPILLLAASAASLLLPPMAATVASAPGTRAAGVTLHVEHHQVVVDNGVVQVTVS
KPQGQITGVRYAGEHNLLHFTNDENSGGYWDVVWNFPGSGHPRGMIDMLDSTELRIVSAS
EEQVELSFRSTYDPSRLNSVRLTVDKRLVMLRGSSGFYCYAILEHGGSWPALNITEARLA
FKLNTARFNYMAVSDEIQRYMPRAADRDAPRGMPLAYKEAVLLLNPAEPQFKGEVDDKYQ
YSVDNKDNAVHGWIAGAPGPAVGFWVVTPSNEFKTGGPLKRELTSHVGPTSLTMFMGSHY
VGNDIVAKIKGGEHWKKVMGPVFIYLNSNTGRGDFHALWEDAKAQAAAEASKWPYTFPES
PDFHKASQRGSVTGRLLVRDRYVSGKDMPARRAYVGLAAPGLPGSWATESKGYQFWARTS
ATCGSFAIGNVRAGVYNLYAWVPGTLGDYMHTATVTVEAGGAVALGDLVFEPPRSGPTLW
EMGVPDRSAAEFFVPDPNPKYVNKLFLGKDRYRQYGLWDRYAELYPAGDPVFTVGESHYS
KDWFFAHVTRKMSNGVDAPTTRRIRFGLSRVVADGTYTLRVALAAAHMSRLQLRVNGAPV
TRRGSSADAGVFVTPDFGEGNAIARHGDHGTWWSFEFGIKGYLLMEGDNNISITQVRAFS
EFMGVMYDYIRLEGPPGSWRDPTQLP
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgatggcggcggttccgatcctcctcctcgccgcctccgcggcgtcgctgctg
ctgccgcccatggctgcgacggtggcgtcggcgccggggacacgcgccgctggcgttacg
ctgcatgtagagcatcaccaggtggtggtggacaacggcgtggtgcaggtcacggtgtcc
aagccgcagggccagatcaccggcgtccgctacgccggcgagcacaacctcctccacttc
accaacgacgaaaactcgggcgggtactgggacgtggtttggaactttccaggctccggc
catccaagaggcatgatcgacatgctggacagtacagagttgaggatcgtatcggccagc
gaagagcaagtggagctctccttcaggagcacctacgacccatcacgcctcaacagcgtc
cggctcaccgtcgacaagaggctagtgatgctgagaggcagctccgggttctactgctac
gccatcttggagcacggcggcagctggccggccctcaacatcacggaggcccggctggcc
ttcaagctcaacacggcgaggttcaactacatggcggtctcagacgagatccagcggtac
atgccgagggcggcggaccgggacgcgccccgcggcatgcccctggcgtacaaggaggcc
gtgctcctcctcaaccccgccgagccgcagttcaagggcgaggtggacgacaagtaccag
tactcggttgacaacaaggacaacgcggttcatggctggatcgccggcgctcccggcccg
gccgttgggttctgggtcgtcacccccagcaacgagttcaagaccggcggcccgctcaag
cgcgagctcacctctcacgtcggccccacctccctcaccatgtttatgggttcacattac
gtcgggaacgacatcgtggccaagatcaaggggggcgagcactggaagaaggtcatgggc
ccggtgttcatctacctcaactccaacaccgggaggggagacttccacgcgctgtgggag
gacgccaaggcgcaggccgcggctgaggcgagcaaatggccctacaccttcccggagtcg
cctgatttccacaaggccagccagaggggctcggtcaccggccggttgctggtcagggac
aggtacgtgagcggcaaggacatgcccgcccgccgtgcctacgtcggcctcgccgcgccg
gggctgcctggctcctgggcgacagagagcaagggctaccagttctgggcgaggacgtcg
gcgacctgcggcagcttcgccatcggcaacgtccgggcaggggtgtacaacctctacgcc
tgggtgcccgggacccttggcgactatatgcacacggctaccgtgaccgtggaggcaggc
ggcgccgttgcactcggcgacctcgtgttcgagccgccgcgatcggggccgacgctgtgg
gagatgggcgtgcctgaccggagcgccgccgagttcttcgttcctgaccccaaccccaag
tacgtcaacaagctcttcctcggcaaggacaggtacagacagtacgggctgtgggacagg
tacgctgaactgtaccccgccggcgaccccgtcttcaccgtaggcgagagccactactcc
aaggactggttcttcgcgcacgtcacgaggaagatgagcaacggcgtagacgcgccgacg
acgcgacggatccggttcggcctgtcccgcgtcgttgccgacggcacctacacgctgcgg
gtcgccctcgcggcggcccacatgtcgagactgcagctgcgggtgaacggtgcgccggtg
acgaggagggggtcgtcggccgacgccggggtgttcgtgacgccggacttcggcgaaggc
aacgcgatcgcgaggcacggcgatcacggcacatggtggagcttcgagttcgggatcaag
gggtacctgctcatggaaggggacaacaacatcagcatcacgcaagtcagggcgttcagc
gagttcatgggggtcatgtacgattacatccggctggaagggcctcccggttcttggcga
gatcccacgcaacttccgtga
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