Hordeum vulgare subsp. vulgare (domesticated barley): 123446900
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Entry
123446900 CDS
T11213
Name
(RefSeq) membrin-11-like
KO
K08496
golgi SNAP receptor complex member 2
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
123446900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123446900
Membrane trafficking [BR:
hvg04131
]
SNARE
SNAP-25[N] (Qb)
Bos1 / Membrin
123446900
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
MLKL_N
Mononeg_mRNAcap
DUF7018
KATNA1_MIT
Lgl_C
NES_C_h
SpoVR
Motif
Other DBs
NCBI-GeneID:
123446900
NCBI-ProteinID:
XP_044979377
UniProt:
F2EEJ9
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All DBs
Position
4H:4222819..4225031
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AA seq
238 aa
AA seq
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MDFSGGGGGATLSEMYQSARRLLLSARDGVARVERLASAPASSSYSASAPPVGAPDPAGA
EAVRREVAQIQGLCAQMDRLWRSIPAKGQRDLWKRKVEQLSEEVDSLKETLDKHSLRQRK
RILEAKERAELFERANGESSHVLQIFDDEAQAMQSARTSSRVLDEAYETGVAILHKYSDQ
RDRLKSAQRKALDVLNTVGLSNSVLKLIEKRHRVDKRIAYGGMIITVVLMVAFWRWTH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggatttctccggcggcgggggcggcgcgacgctgtcggagatgtaccagagcgcgcgg
aggctgctgctgtcggcccgcgacggcgtggcccgcgtcgagcggctcgcctcggcgccc
gcctcctcctcctactccgcctcggcgccgcccgtcggcgcgccggacccggcgggcgcc
gaggccgtgcggagggaggtggcgcagatccagggcctctgcgcccagatggaccgcctc
tggcgctccatccccgccaagggccagcgcgacctctggaagaggaaagtggagcagcta
tctgaggaggttgattcattaaaggaaaccctcgacaagcactcgttgcggcaaaggaag
cgtattttggaagccaaggaaagggcggagctgtttgagagagctaatggtgaatcgtcg
catgtccttcaaatattcgacgacgaagcccaggcaatgcaatcggcccgtacctcctct
cgagtgcttgacgaagcctatgagacaggagtggccatcctccacaagtactctgaccag
agggatcgtctgaagagcgcgcaaaggaaagctctggatgtcctgaacaccgttggccta
tcgaactcggtcttgaagctcattgagaagcggcaccgggttgacaagcggattgcgtat
ggcggcatgatcatcactgtcgtgctgatggttgccttctggcgatggacacactag
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