Hordeum vulgare subsp. vulgare (domesticated barley): 123446944
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Entry
123446944 CDS
T11213
Name
(RefSeq) chaperonin CPN60-1, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123446944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123446944
03110 Chaperones and folding catalysts [BR:
hvg03110
]
123446944
03029 Mitochondrial biogenesis [BR:
hvg03029
]
123446944
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123446944
Enzymes [BR:
hvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
123446944
Messenger RNA biogenesis [BR:
hvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
123446944
Chaperones and folding catalysts [BR:
hvg03110
]
Heat shock proteins
HSP60 / Chaperonin
123446944
Mitochondrial biogenesis [BR:
hvg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
123446944
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123446944
Exosomal proteins of other body fluids (saliva and urine)
123446944
Exosomal proteins of breast cancer cells
123446944
Exosomal proteins of colorectal cancer cells
123446944
Exosomal proteins of bladder cancer cells
123446944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
PARP_regulatory
Motif
Other DBs
NCBI-GeneID:
123446944
NCBI-ProteinID:
XP_044979424
UniProt:
A0A8I7B7J8
LinkDB
All DBs
Position
4H:550935514..550957847
Genome browser
AA seq
741 aa
AA seq
DB search
MEKSWHTSLYKDCNIVPEAEDQRPFPTCVFCSFTKGGQMEMHRIFADEGIPCDICLFPKS
MVEDYLTMNGINMSSFCQNKDFLHRSLTASLIFEAYGVEATSYLWEGTTRLAMEACPYLG
DSITFDQLKELLNKGKPVLAMMIVGPDFEKLRDKEIYKCHPVFLSGKLQKPFEYHRVILI
GHGVTEVTKENFVPFLNSHSDKFGHKGVGRAYFNDLMWFFTLEGKYPPLLQYQPPKIIPL
DRPNLDKPRRRPACDNRRNLDKPWRRSECDIGTVEQTEASGRADAASSWRLDMPQQIAKV
NNGTAWNGTTCLHVLTKEIVDQGCKLMASGMIGIDLRDGICMAVDDVVRNLMSMARKINT
FEEIAQVGTVSANGEKELGDLIAEAIAMVGTEGVITIADGSTRCTELQVLECIKLKRGYF
TKHFITNHKNKTCELDDPLIFIHDKRVSNVQAIKVLEFALMEGKPLFILAEDVDTEAINT
MINEKYYKGMKVCAVKVPGHGENKELNLLAICLLTGGLIFTEGNGMDLWPHILGTSKKVI
VSADDCTIFGGAADDNTIGNRTKQLRSATEKSTGLAEMYCCATIMKIGGMDKMEIIEKKD
RAAHALNATKAAVEEGIVPGGGVALVYAAKDLDKLETANVGQKSGVQIIQNVLKIPFHTN
ASSACRDGEDIVSMILEQNNTGLVYDAAKGEYADMLEAGSVEPLKVIITALMDVQRESCQ
MLTDTGGHLSPKERNKQFAVP
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcatggcacacttcgctatacaaggactgtaacattgtgcctgaagctgag
gaccaacgccctttccctacgtgcgttttctgcagctttacaaaagggggtcaaatggag
atgcaccgtatatttgcggatgagggcattccatgtgacatctgcctatttcccaaatcg
atggtggaagattaccttacaatgaatgggatcaacatgagttcattctgtcagaacaag
gactttttgcaccggtccttgacagctagccttatctttgaagcatatggtgtcgaagcc
acaagctatctctgggaaggcactacacgacttgctatggaagcctgcccgtatctaggc
gattctatcacgtttgatcaactgaaggaactgcttaacaagggcaagccggtacttgct
atgatgattgtgggccctgattttgagaagctcagagataaggaaatttacaaatgccac
cctgtcttcttgtcaggaaagctgcaaaaaccatttgagtaccacagagtaatccttatt
ggacacggagtgacggaagtaacgaaggaaaattttgtaccgtttctcaactcccacagt
gacaagtttgggcataagggtgttggccgggcttacttcaatgacctaatgtggtttttc
actttagagggcaagtatccaccacttcttcaatatcagccacctaaaattattccactc
gacagaccaaaccttgacaaaccaaggcggcggcctgcgtgtgataaccgacgtaacctc
gataaaccatggaggcgatctgagtgtgatattggaacagtggaacaaacagaggcatct
ggaagagctgacgctgcttcctcttggcgtcttgacatgccccagcagattgctaaggtg
aacaatggtactgcttggaatggtacgacctgtctccatgttttgacaaaggaaatagtt
gatcaaggttgcaagcttatggcatctggaatgattggaattgatttgagagatggtatc
tgcatggcagttgatgatgtcgtgagaaacctgatgagcatggcccgaaagataaacact
ttcgaggaaatagcacaggtgggtactgtatcagctaatggggaaaaagaacttggcgat
cttattgcagaggctattgcgatggttggtacagagggagttatcaccattgcggatggt
agcactcgatgcaccgagcttcaagttctggaatgcataaagcttaagagaggctacttc
actaaacactttattaccaaccacaagaacaaaacatgtgaactagatgatcccttaatc
ttcatacatgataagagggtatctaatgttcaagccatcaaagtgttggaatttgcactc
atggagggaaagcctctgtttattcttgcagaagatgtggatactgaagcaataaatact
atgatcaatgaaaaatattataaaggcatgaaggtctgcgcggtcaaagttcctggtcat
ggagagaacaaggaactcaatttacttgctatttgtctccttacaggcggactaatcttt
actgaaggaaacggaatggacctttggcctcacatacttggaacttctaagaaggttata
gtatctgcggatgattgcacaatctttggtggagccgctgatgataataccatcgggaac
agaactaagcagctgagatctgcaactgagaaaagcacgggattggcagaaatgtattgt
tgtgctactattatgaagattggtggaatggataaaatggagattattgagaagaaagac
agagcggcacatgcgctgaatgcaacgaaagctgcagttgaggagggaattgtaccaggt
ggtggtgttgctctggtttatgcggcaaaagacctggataagctggagactgcaaatgtt
ggccaaaagagtggtgttcagattattcaaaatgtcttgaagataccatttcacaccaat
gcttcaagtgcttgtcgtgatggggaggacattgttagcatgatcttggagcagaataat
actggcctggtatatgatgctgccaaaggtgaatatgccgatatgctggaggccggttcc
gttgagccacttaaagtgatcataacagccctgatggatgtccaaagggagtcgtgtcaa
atgttaactgacacaggcggccacttgagcccgaaggaaagaaacaagcaatttgcggtg
ccatga
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