KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123447015
Entry
123447015         CDS       T11213                                 
Name
(RefSeq) ras-related protein Rab5A-like
  KO
K07887  Ras-related protein Rab-5A
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04144  Endocytosis
hvg04145  Phagosome
hvg04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    123447015
   04145 Phagosome
    123447015
   04148 Efferocytosis
    123447015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hvg04131]
    123447015
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hvg04147]
    123447015
   04031 GTP-binding proteins [BR:hvg04031]
    123447015
Membrane trafficking [BR:hvg04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    123447015
 Endosome - Lysosome transport
    123447015
Exosome [BR:hvg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123447015
  Exosomal proteins of other body fluids (saliva and urine)
   123447015
  Exosomal proteins of colorectal cancer cells
   123447015
  Exosomal proteins of bladder cancer cells
   123447015
GTP-binding proteins [BR:hvg04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    123447015
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA VitD-bind_III AAA_24 Condensation AAA_22 AAA_16 AAA_PrkA TsaE ABC_tran
Other DBs
NCBI-GeneID: 123447015
NCBI-ProteinID: XP_044979504
UniProt: A0A8I6Y9U8
LinkDB
Position
4H:6247319..6251609
AA seq 204 aa
MAASAGSKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETV
KFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDISNQASFTRAKKWVQELQAQGNQNTVVA
LAGNKADLLEAREVQIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRLLQGQAAQN
PQAAGMVLSQRPNERVVSAASCCS
NT seq 615 nt   +upstreamnt  +downstreamnt
atggcggccagcgccggcagcaagatccgcaacgccaagctggttcttctcggcgatgtg
ggtgctgggaaatccagcctggtgcttcggttcgtaaaaggacaatttgttgagttccag
gaatcgacaattggagcggctttcttctctcaaacactggctgttaatgacgagactgtg
aagtttgaaatctgggatactgctgggcaggagaggtatcatagcttggcccccatgtac
tataggggtgctgccgcagccatagttgtctatgacatctcgaaccaggcatccttcacc
cgagcaaagaaatgggttcaagaacttcaagctcaaggaaaccagaatacagtagtggct
cttgctggcaacaaagctgatttgctagaggcgagggaggttcaaatagaggaagccaag
acatatgcgcaggagaatggcctcttcttcatggaaacgtctgccaagactgcaaccaat
gtgaatgacatattttatgagattgcgaagagactgctgcaagggcaggcggcgcagaac
ccacaggcggcggggatggttctctcccagagacccaacgagagagtggtcagcgcggct
tcgtgctgctcctga

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