Hordeum vulgare subsp. vulgare (domesticated barley): 123447316
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Entry
123447316 CDS
T11213
Name
(RefSeq) importin-5-like
KO
K20222
importin-5
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123447316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123447316
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
123447316
Pre-60S particles
123447316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
Importin_rep_6
HEAT
HEAT_2
TOR1L1_N
HEAT_EF3_N
MMS19_C
Vac14_Fab1_bd
RIX1
Cnd1
Arm
HEAT_Maestro
TPR_TNPO3_IPO13_3rd
Htt_N-HEAT_1
Adaptin_N
ARM_ARMC5
Phasin_2
Motif
Other DBs
NCBI-GeneID:
123447316
NCBI-ProteinID:
XP_044979842
UniProt:
A0A8I6Y4F2
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Position
4H:13202823..13212734
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AA seq
1105 aa
AA seq
DB search
MDPQAAEAVLGADPAPLTELLGDLASPANEARSRAERTFHALRAAHPDPLALRLAHLLLS
PAHPSAPMAAVLLRRLISPGSQAFVYPSLAPATQSSLRALLLSAASAPGLSRSISRKLSD
AVAELAAHLLPSGSWPDLLTFLYKSVASPSSPPALQESALNILARLASHLAAGFPNLHAL
LLAALSHPSSADVRVAGLNAAISVIQSLSSAADRDQFQDLLPAMMRALAESLNCGNEGSA
QEALEMMIELAGLEPRFLRRQLPDVVAAMLQIAEAPGLEDGTRHLAVEFVVTLAEARERA
PGMMRRLPRYVGRLFAIVMTMLLDVQDEPAWYAAVSEEEDAGETGSFVFAQECLDRLAIA
VGGNTILPVAAELLPSFIGAEEWKRRHAALMTISQIAEGCAKVMTKNLDQVVGMVLNSFQ
DPHPRVRWAAINAVGQLSTDLGPELQNKLHHVVLPALASAMDDSENPRVQAHAASAILNF
SENCRPEILTPYLDVIVGKLLLLLQSGSQMVQEGALTALASAADSSQEHFQKYYDAVMPY
LKAILMNATDKSSRMLRAKSMECISLVGMAVGKQKFRDDAKQVMEVLMSLQGSHMEADDP
ITSYMLQAWARLCKCLGQEFLPYMSVVMPPLLQSAQLKPDVSITSADEDGESDDDGVETI
TLGDKRIGIRTSLLEEKATACSMLCCYADELKEGFFPWIDQVATTLVPLLKFYFHDEVRK
AAVSAMPELLRSAKLAVEKGQAQGRDDSYLKQLSDYIVPALVEAMHKEPETQICASILES
LNESIQMSGTLLDEGQVRYIVEGIKEVITASSNRRTERTERANAEDFDSEEDELLREENE
QEDEIFDQVGDCLGTLVKTFKSYFLPFFDELSVYLTPMLGKDKTSEERRVTICIFDDVAE
HCREAAVRYYDTYLPSLLEACASENPDVRQAAVYGIGICAEFGGSAFRPHTGEALSRLYN
VIKHPNALDLDNAMAYDNSVSALGKICQFHRDSIDASQVIPAWLSCLPLKNDLVEAKIVH
EQMCAMLEKSDSELLGHNNQHLPKIVSTFAEILCAGKDLATEQTASKIVNLLRQLQTTLP
PSVLASTWSTLQPQQQLALQSVLTS
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcaggcggcggaggcggtgctgggcgcggacccggcgccgctgacggagctg
ctgggggacctggcgtcgccggccaacgaggcgcggtcgcgggcggagcggacgttccac
gcgctgcgggccgcccacccggacccgctcgcgctgcggctcgcccacctgctgctctcc
ccggcgcacccgtccgcgcccatggccgccgtcctcctccgccgcctcatctccccgggc
tcccaggccttcgtctacccgtcgctcgccccggccacgcagtcctcgctccgcgcgctg
ctcctctccgccgcctccgcgcccggcctctccaggtccatctcgcggaagctctccgac
gccgtcgccgagctcgccgcccacctgctgccctccggctcctggcccgatctcctcacc
ttcctctacaagtccgtcgcctccccctcctcgccccctgccctgcaggagtccgcgctc
aacatcctcgccaggctcgcctcccacctcgccgccggcttccccaacctccacgcgctc
ctcctcgccgcgctctcgcacccctcctccgccgatgtccgcgtcgccggcctcaacgcc
gccatcagcgtcatccagtccctctcctccgccgccgaccgcgaccagttccaggacctc
ctccccgccatgatgcgcgccctggccgagtcgctcaactgcgggaacgagggctccgcg
caggaggcgctcgagatgatgattgagctcgctggcctggagccgcgtttcctccgccgc
cagctgcccgacgtcgtcgccgccatgctgcagatcgccgaggcccctgggttggaggat
ggcacacgccaccttgctgtcgagttcgttgttacccttgccgaggcaagggagcgtgcg
ccggggatgatgaggaggctgccgcggtatgtcggcaggcttttcgcgatcgtcatgacc
atgctgcttgatgtccaggatgaaccggcatggtacgccgcagtgtccgaggaggaggac
gctggggaaactggaagctttgtctttgcacaagagtgtcttgaccggcttgcaattgct
gttggtggcaacaccatcttgcccgtggctgccgagttgctcccgtcgtttatcggcgct
gaagagtggaagagacgtcatgcggcactcatgacgatatcacagattgcggaaggctgt
gctaaggtgatgactaagaatcttgatcaggtagttgggatggtgctcaattccttccag
gatcctcatcctcgggtgaggtgggcagcaatcaatgcagtagggcagctttcgacggac
ttggggcctgagttgcagaacaagttgcaccatgttgtactccctgcgttggcttcggcc
atggatgattctgagaacccacgcgtacaggcacatgcagcttctgcaattctgaacttc
agcgaaaattgcagacccgaaattttaactccatacttggatgtgatagtcggcaagctt
ctcctgttgcttcagtctggaagccaaatggtgcaagaaggtgctttgactgctttagca
tcagctgcagattcttcgcaggaacacttccaaaaatattatgatgcagtcatgccatat
ctgaaggctatactcatgaatgcaactgataaatcaagcagaatgttgcgtgccaaatcc
atggaatgcataagtttagttggtatggctgttgggaaacagaaatttagggatgacgct
aagcaggttatggaagttttgatgtcactgcaaggatctcacatggaggctgatgaccca
ataacgagttacatgctgcaagcatgggcaagactttgtaagtgccttggtcaggagttc
ctcccctacatgagtgttgttatgccccctctacttcagtctgctcagcttaaaccagat
gtgagcatcacttctgcagacgaggatggtgaatctgatgatgatggtgttgagactatt
accctgggagataagaggattggcatcaggaccagtcttctggaggagaaagcaacagca
tgtagtatgctatgttgctatgctgatgagctcaaggaagggttttttccatggattgat
caggttgcaactactctggtacctctcctcaaattttattttcatgatgaagttaggaag
gcagctgtttcagcgatgcctgagcttctgcgttcagctaagttggcagtagaaaaaggc
caagctcaaggccgggatgattcttatcttaagcaactatctgattacatagttccagct
cttgtagaggccatgcataaagaacccgagacacaaatttgtgcaagcatactggagtca
ttgaacgagtcaattcagatgtcaggaacacttcttgatgaaggccaggttagatatata
gtggagggaatcaaagaagtaataacagcaagttctaataggaggacagaacgaacagag
agggcaaacgctgaagacttcgattcagaagaagatgagctactgagggaagaaaatgaa
caggaggatgaaatctttgatcaagttggcgattgtttgggcaccctggtcaaaactttt
aagtcttacttccttccattctttgatgaactctctgtctacttgacacctatgttgggc
aaggataagacatcagaagaaagaagagtcacgatatgcatttttgatgatgttgcagaa
cattgtcgagaagcagcagttaggtattatgacacatatctcccttccctgttagaagcc
tgcgcaagtgaaaacccagatgttagacaggctgcagtttatggtattggcatctgcgct
gagtttggtggttctgcatttaggcctcatactggggaggcactgtccagattatacaat
gtaatcaaacatcctaatgcattggatttggataatgcgatggcatatgacaattctgtt
tctgctcttggaaagatatgtcaatttcatcgtgatagcattgatgcatctcaggtcatt
cctgcttggttaagttgtttgccactcaaaaatgacctggttgaggccaagattgttcat
gaacagatgtgtgcaatgcttgagaagtctgacagtgagcttttgggccataataatcaa
catcttccaaagattgtatctacttttgcagagatattgtgcgcgggtaaggatctggcg
acagaacagactgctagcaagatagtcaatttgctaagacagcttcagaccaccctgcct
ccttcagtacttgcctcgacatggtctacccttcagccacagcaacaacttgcgttacaa
tctgtattgacatcatag
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