Hordeum vulgare subsp. vulgare (domesticated barley): 123447345
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Entry
123447345 CDS
T11213
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123447345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123447345
03012 Translation factors [BR:
hvg03012
]
123447345
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123447345
Translation factors [BR:
hvg03012
]
Eukaryotic type
Release factors
123447345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
123447345
NCBI-ProteinID:
XP_044979875
UniProt:
F2DCE8
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All DBs
Position
4H:13869555..13872676
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AA seq
437 aa
AA seq
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MSDSHETDKNIEMWKIKKLIKGLESARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALSELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINQATSQPNVAGLILAGSADFKTELSQS
DMFDQRLQTKILNVVDVSYGGESGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLMVWENLDVNRYVLKHSATGEIIIKHLNKETETDQSNFRD
PSTNAELEVQEKTSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDDLDDDEGVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagtcatgaaaccgacaagaatattgagatgtggaagattaagaagctgatc
aagggacttgagtctgctagaggcaatggcacaagcatgatctctctgatcatgcctcca
cgtgatcaagtctcgcgtgtgaccaagatgttgggtgatgaatatggtactgcttcaaac
ataaagagtagagtcaatcgtcaatctgtcttgggagccatcacctcagctcagcagagg
ctgaagctgtataacagggttcccccaaatggattagttctttacactggaacaattgtt
actgatgatggcaaggaaaagaaggttacaatcgattttgagccattcaagcccatcaat
gcgtccttgtacctttgtgacaacaagttccacactgaagccttgagtgagctcctggaa
tccgatgacaagtttggtttcattatcatggatggtaatggtactctttttggcacactc
agcggcaatactcgtgaagtgcttcacaaattcactgtggatctcccgaagaagcatgga
agaggagggcaatctgctctgcgttttgctcgccttcggatggagaagcgtcacaattat
gtccggaaaacagctgaacttgctacccagttcttcatcaaccaagctaccagccagcct
aatgttgcgggactaatattggctggttctgctgattttaaaacagaactcagccagtct
gacatgtttgatcagcgccttcagaccaaaatacttaatgtggttgatgtttcgtatggt
ggtgagagcggtttcaatcaagccattgagttatcagctgaaattctagcaaatgtgaag
ttcatacaagagaagaagttgatcgggaagtactttgaagagattagtcaagatactggg
aagtatgtctttggtgttgatgacaccctgaaggctcttgaaatgggtgctgttgaaact
ttgatggtgtgggaaaaccttgatgtcaatcggtatgtgcttaagcacagtgcaactgga
gaaattatcataaagcatctgaacaaagaaactgaaaccgaccagagcaacttccgtgat
ccatccaccaacgctgagttagaagtccaggagaagacctcacttttggaatggttcgct
aatgaatacaagaagtttgggtgcacccttgaatttgttaccaataaatctcaggaggga
tcacagttctgtagagggtttggtggcattggtggtatcctgcgctatcagctggacatt
cgttcctttgatgatcttgatgacgatgagggtgtctatgaagattctgactag
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