Hordeum vulgare subsp. vulgare (domesticated barley): 123447678
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Entry
123447678 CDS
T11213
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hvg03016
]
123447678
Enzymes [BR:
hvg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
123447678
Transfer RNA biogenesis [BR:
hvg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123447678
Prokaryotic type
123447678
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
123447678
NCBI-ProteinID:
XP_044980244
UniProt:
A0A8I6X632
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Position
1H:complement(482053252..482060458)
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AA seq
695 aa
AA seq
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MARSSSVTEAEVGIACFTSSLPGFRGVLKHRYSDFIVHEVARDGSVVRLTSLDLPDQCVD
AKEEEKAAPAADADHSKALESFSGLCGEADCRALRGLLEKVAAGGEGEFSPVMLSPDADK
AHRSEVHNFFKKNFKFLVTDTVEHSDGVQKYIRVRVGSEAGGGRGRGGGGRGGGDRGRKR
KNMNGSDWGDDRPFDSRGSSSWPAHAGKFLRFHLCKENKDTQDALGVIGKMLGLQSRSFG
FSGTKDKRAVTTQQVTVFKVPANKIAALNKRLYGIKVGNFCYVKEGLGLGQLMGNRFTIT
LRGVVAESEDMIKAAVDGLGKNGFINYYGLQRFGSGSVPTHLIGAALLRGEWKSAVHLVL
DPREGERDDIKEVREHYKQHGDIDMALRNFPRHLVAEKAILQCLRKCPGNYLQALKGIPR
PLRMMYVHAYQSYLWNHAASMRVEKYGISQVIEGDLVYTKESHPGEATSVGTSEVDSLTN
ASEIDICLEALPEENIQSVKLVDSEDLTKGIYSFEDVVLPLPGSQALFPGNEVAQIYHEM
AKKDGISLTENAHGVKEFSITSMKGGYRRVFQKPIDFEWELMTYTDDSASLAETDLDILS
KGKLTEAKVANEPAPSGNSASNPPDCKLEEPLETSMPTSETSLVENKSIGSSDTLPSKLA
VKLAFTLPASSYATMAIRELLKDSTSVAYQKTLDC
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctcgagctccgtcaccgaggccgaggtcggcatcgcctgcttcacctcctcc
ctcccgggcttccgcggcgtcctcaagcaccgctactccgacttcatcgtccacgaggtc
gcccgcgacggctccgtcgtccgcctcacctccctcgatctccccgaccagtgcgtggat
gccaaggaggaggagaaggcggcgccggcggccgacgccgaccactccaaggccctcgag
tcgttcagcgggctctgcggcgaggcggactgccgcgcgcttagggggcttctggagaag
gtcgcggccggcggcgagggtgaattctcgccggttatgctctcgcctgatgccgacaag
gctcatcgatcggaggtgcacaattttttcaagaagaacttcaagttcttggtcacagac
acagttgaacacagcgatggggttcagaaatacatcagggtgcgcgttggatctgaagct
ggaggagggcggggccgtggcggtggtgggaggggtggtggtgacagaggaaggaagagg
aagaacatgaatggctctgactggggagacgacaggccatttgacagtagagggtcgtct
agttggccagctcatgctggcaagttcctgaggtttcacctttgcaaagaaaacaaggac
acccaagatgcattgggagtgataggaaaaatgttaggactccagtcacgctcgtttggg
ttttctggaacaaaggataaacgtgctgttacgacgcaacaggttaccgttttcaaggtg
ccagcaaataaaatagctgcacttaataagcgactatatggcatcaaagttggaaacttc
tgttatgtaaaggagggacttggtcttggtcaactcatgggaaatcggtttacaattacc
ctgagaggtgttgttgcagaatcggaagacatgataaaggctgctgtggatggtttagga
aagaacggttttatcaactactatggtttgcagcgctttggaagtggttcagtaccaacc
caccttattggagctgctttgcttagaggagaatggaaaagtgctgtacacttggttctt
gatccaagggaaggagagcgtgatgacataaaggaggtgcgtgaacattacaagcaacat
ggtgatattgatatggctctgaggaacttccctcgccatcttgtggctgagaaggctatt
cttcaatgtttgaggaaatgccctgggaactatctacaagcattgaagggtataccaaga
ccgttaagaatgatgtatgtccatgcttaccaaagttacctttggaatcatgctgccagc
atgagagttgaaaagtatggcatttcacaggttatagagggtgatctagtttataccaag
gaaagccatcctggagaagcaacttcagtgggtacttcagaagttgatagccttacaaat
gcgtctgaaattgatatttgccttgaagcacttccagaagaaaatatccagtctgtgaag
ctcgttgattctgaagatttaacgaagggcatctactcgtttgaagatgtcgtccttcct
ttgcctggttcacaagcattgttccctgggaatgaagttgctcagatttaccatgaaatg
gctaaaaaggatggcattagcttgacagagaatgctcatggtgtgaaggagttctcaatt
acaagcatgaaaggaggttaccgtcgggtgttccagaagcctattgattttgagtgggaa
ctcatgacatacacggatgacagtgcatctttagcagaaaccgatttggatattctctcc
aaaggcaagcttactgaagcaaaggtagctaatgagcctgcacctagtggaaattctgcc
tccaatccacctgattgcaagttggaagagccattggagacctccatgccaaccagtgaa
actagcttagtagaaaacaagtctattggcagctcagatacattgccaagcaaactggct
gtaaaattagcatttactttacctgcatcgtcctatgctacaatggcaatcagggagttg
ctgaaggattcgacctcggttgcctaccagaaaacgcttgattgctaa
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