Hordeum vulgare subsp. vulgare (domesticated barley): 123447805
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Entry
123447805 CDS
T11213
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123447805
03012 Translation factors [BR:
hvg03012
]
123447805
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123447805
Translation factors [BR:
hvg03012
]
Eukaryotic type
Initiation factors
eIF-3
123447805
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eIF2A
ANAPC4_WD40
RRM_1
WD40_WDHD1_1st
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
123447805
NCBI-ProteinID:
XP_044980421
UniProt:
A0A8I6XG13
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Position
4H:45361332..45365638
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AA seq
721 aa
AA seq
DB search
MALAISMEAIDARARELGIDLDSVDLDSITLPPGEDFDILSDDEDLLQNEDIPELEMGFA
NIIVVDNLPVVPPEKYEKLENVLRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEYNTP
QEAELAVEKTHGYKLDKSHIFAVNMFDDFEKYMKVPDEWAPAEIKPYTPGENLLKWLTDD
KARDQFVIRASTFTEVYWNDARRAMPELVYQKQYWTDSYIQWSPLGTHLATVHRQGAQVW
GGDDKFVRLMRFAHPQLKLIDFSPGEKYLITYSSHEPSNPRDTHRVVLIIFDVRTGKVMR
EFKGSADDFTTGGNMGVSGVSWPIFRWGGGTDDKYFARLGKNVISVYDTETFALIDKKSL
KVENVVDFSWSPTDPIISLFVPELGGGNQPARVSLVQIPGKEEIRQKNLFSVSDCKMYWQ
NNGEYLAVQVDRYTKTKKSIYTGFELFRIKERDIPIEVFELDNKNDKIIAFAWEPKGHRF
AVIHGDGPKPDISFYTMKAVNNNVSRVSKLTTLKGKQANALFWSPAGRFIVLAGLKGFNG
QLEFFNVDDLETMATGEHFMATDIMWDPTGRYLATAVTSVHEMENGFHIWSFNGKLIYKI
SKDHFYQFQWRPRPPSLLTPEKEEDISKNLKRYSKKYEQEDQDVNAHLDLEERKRRMQLQ
EVWESWVTKWKQLHEEERAFRMQLRGGEDSDKEEEAEYKEIEAEELVDVTEETVAFDLDQ
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcgctagcaatctcgatggaagccatagatgcgcgcgcgcgggagctggggatcgac
ctcgactccgtcgacctcgactccatcaccctccctcccggcgaggacttcgacatcctc
agtgacgacgaggatttgcttcagaatgaagacattccagagcttgagatgggttttgca
aacattattgtggtggacaatctgccggttgttcccccggagaagtacgagaagctggag
aatgttttgcgcaagatatatggtcaacttggtgtgatcaaagaaggcgggctttggatg
cctacagacccgaagacgaagaagaccctgggctactgcttcattgagtataatactccg
caggaagctgagcttgctgtggaaaagacacatggctacaaactggacaaatctcacata
tttgctgttaatatgtttgatgactttgagaagtacatgaaggttcctgatgagtgggcg
cctgctgaaatcaagccatacactcctggagaaaatcttctgaagtggctaactgatgat
aaggccagagatcagtttgtgatccgtgctagtacgttcacggaagtgtactggaatgac
gctagacgggcaatgcctgagcttgtgtaccaaaaacagtattggacggatagctatatt
cagtggtcccctcttggaacacacttggctaccgtgcataggcagggcgcgcaggtgtgg
ggtggtgatgataagtttgttcgtctaatgcgctttgctcatccacagctgaaactcatc
gatttctctcctggtgagaaatatttgatcacttacagcagccatgagcctagcaacccc
agagacacacatagggttgtactaattatctttgatgtacggactggaaaagtaatgcgg
gagttcaagggaagtgctgatgatttcactactggtggaaatatgggtgtctctggtgtt
tcatggcctatcttcaggtggggtggtggaacagatgataagtattttgctaggcttgga
aagaatgttatatctgtctatgatactgagacgttcgctcttattgataagaagtccttg
aaggtagaaaatgtggttgacttcagttggtctcccactgatcctatcatatcactcttt
gtgcctgaattgggtggtggaaatcagcctgccagggtgagtcttgtgcaaattccgggc
aaggaggagattcgacagaaaaaccttttcagtgttagcgactgcaaaatgtactggcag
aacaatggagaatatctggctgtccaggtagacaggtacacaaaaacaaagaagagcatt
tatactgggttcgagctgttcagaatcaaggaacgtgacatcccaattgaggtctttgaa
ctggacaacaagaatgacaagataattgccttcgcatgggagcctaaaggtcaccgcttt
gctgttattcatggtgatgggcctaagcctgatataagtttctacaccatgaaagcagtc
aacaataatgttagtcgtgtgtccaagctcaccacactcaagggcaagcaggccaatgca
ttgttctggtctcctgctgggcgtttcattgttctggcagggttgaagggtttcaatggc
cagctggagttcttcaacgttgatgatcttgagaccatggcaacaggagaacattttatg
gcgaccgacatcatgtgggatcctactggaagatacctcgcaaccgcagttacctcggtt
catgagatggaaaatggtttccacatctggtccttcaatggcaagctaatttacaagatc
tcaaaagatcacttctatcagttccaatggcgcccaaggccaccgtcgctacttactcct
gagaaggaggaggacatctcgaagaacctcaagcggtacagcaagaagtacgaacaagag
gaccaggatgtgaacgcccatttggacttggaggagcgcaagagacggatgcagcttcaa
gaggtgtgggaatcatgggtcaccaagtggaagcagctgcacgaggaggagcgagcattc
aggatgcaactcagaggcggggaggacagtgacaaggaagaagaggcggagtacaaggag
attgaggccgaggagctggttgatgtcacagaggaaaccgttgccttcgacctggaccag
gagtga
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