Hordeum vulgare subsp. vulgare (domesticated barley): 123447806
Help
Entry
123447806 CDS
T11213
Name
(RefSeq) chaperone protein ClpC2, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hvg03110
]
123447806
Chaperones and folding catalysts [BR:
hvg03110
]
Heat shock proteins
HSP100
123447806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_18
UVR
TniB
Zeta_toxin
NBD_SMAX1
AAA_14
NACHT
AAA_28
AAA_25
IstB_IS21
RsgA_GTPase
AAA_3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
123447806
NCBI-ProteinID:
XP_044980422
LinkDB
All DBs
Position
4H:complement(45377814..45383535)
Genome browser
AA seq
938 aa
AA seq
DB search
MESTLLRPPALGLGSPAGLGGSTASWRSRSAERPPSVVPALPIKPARWRSVKMSAIAGHR
RDLHTPAVTLTPASMFGGGGFGPSSSSSRGSSTRGRRRVVARAMFESFTEKAIRVIMLAQ
EESRRLGHHTVGSEQILLGLVGEGTGIAAKVLRSAGLNLKDARAEVEKVLGRGPGLIPVE
IPFTASAKKVIESSNEESRQLGHNYIGTEHLLLGLIREDDGAAAIVLKNFQADLGDIRNE
VIKMITEMSEDQTVGAGVGGGSSGAKMPTLEEYGTNLTKLAQEGKLDPVVGRKKQIERVL
QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETVEGKTVITLDMGLLVAGTKY
RGEFEERLKKLMEEIKQNGDIILFLDEVHTLVGAGAAEGAIDAANILKPALARGELQCLG
ATTIDEYRKHIEKDPALERRFQPVKVPEPTVDETIGILKGLRERYEIHHKLRYTDEALIA
AAQLSYQYISDRFLPDKAIDLVDEAGSLVRLRHAKLPDEAKDLDKKLKEITRQKNDAIRS
QQFETAAELRSEELELKTQIMSLVDKSKEVSKAEVESGASTGPMVTEADIQRIVASWTSV
PVEKVSVDESSRLLKMEETLHGRVIGQDEAVRAIGRAIRRARVGLRNPNRPVASFIFAGP
TGVGKSELAKALAASYYGSEEAMVRLDMSEFMERHTVAKLIGSPPGYVGYTEGGQLTEAV
RRRPYTVVLLDEIEKAHPDVFNLMLQIMEDGRLTDSRGRTVDFKNTLIIMTSNVGSSVIE
KGGKQLGFDHDDGEARNSYGRIKSLVDEEMKQYFRPEFLNRLDEMIVFRQLTKMEVKEIA
AIMLDEVAGRMRAKGIELLVTESFKELVVEEGYDPSYGARPLRRAIMRLLEDKLADKMLA
EDVKEGDGVIVDADPAGNVVVLSRHSDLPEDQPLAFPA
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaccttgctgaggccgcccgctctggggctgggatcacccgccgggcttgga
ggcagcacggccagctggaggtcccggagcgccgagaggcctccctccgtggtcccggcg
ctccccataaagccggcacgctggcggtccgtcaagatgtcagcgatcgccggccaccgg
cgagatttacacacccctgcagtcacgctcacgcctgcgtccatgtttggcggcggcggc
ttcggaccgtcgtcgtcgtcgtcccgcggatcgtcgacgaggggccgacgccgcgttgtc
gccagggccatgttcgagagcttcaccgagaaggccatcagggtgatcatgctggcgcag
gaggagtcgaggcgcctcgggcaccacacggtcggcagcgagcagatcctcctgggcctc
gtcggagagggcaccggcatcgccgccaaggtgctcaggtccgccgggctgaacctcaag
gacgctcgcgccgaggtggagaaggtcctcgggaggggccccggcctcatccccgtcgag
atccccttcaccgcctcggccaagaaggtgatcgagtcctcaaatgaggagtcgcgccag
ctagggcataactacatcggaacggaacacttgcttctcgggttgatccgtgaagatgat
ggtgcggcagccattgtacttaagaactttcaggctgatctcggtgacatacgcaatgag
gttatcaaaatgattactgaaatgtctgaagatcaaactgtcggtgccggcgttggggga
ggaagcagtggggccaagatgccaaccctggaggagtatgggactaatctaacgaaatta
gcacaggaggggaagctagatcccgtcgtcggaaggaaaaaacagatcgagcgtgtgctg
cagatcttggggagacgaacaaagaacaatccctgcctgattggagaacccggtgtcgga
aagacggctatcgcggaaggccttgcgcagcgcattgccaccggggatgtgcctgaaaca
gttgaagggaaaacggttatcacccttgatatgggacttcttgttgccgggaccaaatac
cgtggagagttcgaagaaaggttgaagaaactgatggaagagatcaagcagaatggagac
ataatacttttccttgatgaagtccacactctggtgggagcaggagcagcagaaggtgct
attgacgctgctaacattctgaagccagcattggcaagaggtgaacttcagtgccttggg
gccactaccattgacgaatacaggaagcacattgagaaagaccctgcgctggagaggcgc
ttccaaccagtgaaagttccggagcccacagttgatgagaccataggaatcctcaaaggg
ctccgggagcggtacgagatccaccacaaactccgatatacggatgaagcgctgattgcc
gctgctcagctctcataccaatacatcagtgatcgtttcctcccagacaaagcaatcgac
ctggttgatgaggcggggtctcttgtcaggctacgccatgccaagctacctgacgaagct
aaagatctcgacaagaagctcaaggaaatcaccagacagaagaacgacgccatccgctcc
cagcaattcgagacggccgcagagctccgcagcgaagagctggagctcaagacccagatc
atgtcgctggtggacaagagcaaggaggtgagcaaggcggaggtggagtccggcgcgtcg
actggcccgatggtgacggaggcggacatccagcgcatcgtcgcgtcgtggaccagcgtc
cccgtggagaaggtctccgtggacgagtcgagccggctgctcaagatggaggagaccctg
cacgggcgcgtcatcggccaggacgaggccgtgagggccataggccgcgccatccgccgc
gcgcgcgtcgggctcaggaaccccaaccggccggtggccagcttcattttcgccggcccg
acgggcgtgggcaagtcggagctggccaaggcgctggcggccagctactacggctcggag
gaggccatggtccggctggacatgagcgagttcatggagcggcacacggtggccaagctc
atcggctcccctcccggctacgtcgggtacacggagggcgggcagctgacggaggccgtc
cggcggcggccctacaccgtggtcctcctggacgagatcgagaaggcgcacccggacgtg
ttcaacctgatgctgcagatcatggaggacggccggctgacggacagcaggggccggacg
gtggacttcaagaacacgctcatcatcatgacctccaacgtcggcagcagcgtgatcgag
aagggcgggaagcagctgggcttcgaccacgacgacggcgaggcccgcaacagctacggc
aggatcaagagcctggtggacgaggagatgaagcagtacttccggccagagttcctgaac
cggctcgacgagatgatcgtgttccggcagctcactaagatggaggtcaaggagatcgcc
gccatcatgctcgacgaggtggccggccggatgagggccaaggggatcgagctgctggtg
acggagagcttcaaggagctggtcgtggaggaaggctacgaccccagctacggcgcgcgg
ccgctgaggagggccatcatgaggcttctcgaggacaagctcgccgacaagatgctcgcc
gaggatgtcaaggagggagatggggtcatcgtcgacgccgacccggcagggaacgtcgtc
gtcctcagccggcacagcgacttgccggaggaccagccgctggcgtttcctgcctag
DBGET
integrated database retrieval system
