Hordeum vulgare subsp. vulgare (domesticated barley): 123447827
Help
Entry
123447827 CDS
T11213
Name
(RefSeq) LOW QUALITY PROTEIN: hemolysin A
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123447827
Enzymes [BR:
hvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
123447827
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
123447827
Ribosome biogenesis [BR:
hvg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
123447827
23S rRNA modification factors
123447827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Methyltransf_24
S4_2
Motif
Other DBs
NCBI-GeneID:
123447827
NCBI-ProteinID:
XP_044980449
LinkDB
All DBs
Position
4H:49126573..49131504
Genome browser
AA seq
341 aa
AA seq
DB search
MMACRLRFHQLRLVGVRPTCCSPSRQFAAVKSQKIQPPKKKKRLDEACLERYQQYSRTYI
QSWILQGKVHVNGRVVNKAGTQVSDKSVIEIKAEIPKYVCRAGHKLEAAIKEFGVDCDGK
VALDSGLSTGGFTDCLLQHGASHVYGVDVGYGQVAEKIRVHEHVSVIERTNLRHLPKLPQ
LVDLVTLDLSFISILVVMPAVVKVMKTESTLITLIKPQFEARRSQVGKGGIVRDPLVHKE
VLDRIISGIEQFGFRNEGWIESPLKGAEGNIEFLACFQRIQFQSHKQRERQMQSQREREW
QKQWRRRWRSRSRSQRKHDYYYVHGMASFFLENSWRILIDL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttgccggctgcggttccaccagcttaggctggttggagtccggcccacctgc
tgctctccgtccaggcagttcgcggccgtcaaatcccagaaaatccagccccccaagaag
aaaaagcgattggatgaggcgtgccttgagaggtatcaacaatacagtagaacgtacatc
cagtcatggattcttcagggtaaggtccatgtgaatggaagagtcgtgaacaaagctgga
acgcaagtatctgacaagtcggtcatagaaatcaaggcggaaatcccgaaatatgtatgt
agggctgggcataagcttgaggcagctatcaaagaatttggcgtggactgtgatggaaag
gtagcccttgattcagggctgtctacaggtggttttactgactgcttacttcagcatggg
gcatcacatgtgtacggtgttgatgttggctatggacaggtggctgaaaaaatccgtgtg
catgaacatgtctcagtaattgaacggacaaatttaagacatcttcctaagctgccacaa
ttggttgacttggtgacactggacctatcattcatctcaattcttgtggttatgcctgct
gtggtgaaagtaatgaagaccgagtcaacattgataacacttatcaaaccccaatttgaa
gctcgtagatctcaggtaggaaaaggtgggattgttcgtgaccctctggttcataaggag
gtgttagataggataatttcaggcattgagcagtttggattccgcaatgagggctggatt
gagtctccgctgaagggcgcagaagggaacatagagtttcttgcctgcttccagaggatc
caattccagagccacaagcagagggagaggcagatgcagagccagagggagagggagtgg
cagaagcagtggcggagacggtggcggagccggagccggagccaaaggaaacatgattat
tattatgtccatggcatggcaagtttttttttagagaatagctggagaattctgattgat
ctgtaa
DBGET
integrated database retrieval system
