Hordeum vulgare subsp. vulgare (domesticated barley): 123447852
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Entry
123447852 CDS
T11213
Name
(RefSeq) PHD finger protein At1g33420-like
KO
K26271
PHD finger protein MS1/MMD1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123447852
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
123447852
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GFIT
Motif
Pfam:
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
123447852
NCBI-ProteinID:
XP_044980487
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Position
4H:55046038..55049285
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AA seq
694 aa
AA seq
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MAVHGRPTKRARRGRVLAEPGLLDLRAFPGRKERAGPASFRAGVRGFLSRHAAPAAEWEQ
GAVLGDAGAVWQVGFRVGGEEGEASVVVMDVVEEDVPRARRVHCDHCTVAGWSRHPVCGK
KYHFIIRNEKMPSCKTCWRCGLMVQLFETRCPACTHGSGLSHDESEDWDYLQIDDPRHLL
HGMVHENGFGHLVRINGHEGGSSLLTGYQLMDFWDRLCTYLRVRKVSVLDVSKKFEVDYR
VLNAVATGCSWYGQWGFKLGSGSFGITSETYCKAIENLSSVSLSHFFPHSRYPRNQLQDT
IAFYQSLSKRPLVTFRDLFLYVLGLAASKNVHTHPVTMHKRELAHDADLKDGNWADEKIK
QAMDVALKVLRAADRWVAVRTLKAATAHPIGSPQLVDYCIKTIVGTRTYDGMIVVVRCNS
ETNTIEYRLTNEILPPKNVSMPTREHLRRDIKFLYDALLFRHTMQPYKPEQIHEHAKRHA
TILLDCKQFIKHYDLEEDFLPQNNSVLHIWCQVELLDQAGDPPSLPAELLTLPQTATVGD
LKMEATRTFRSIYLMLQSFVANQLLDCSTADDTTQVKLLFGEKGSVSIQGKCVGGERRVA
IYRMERGVDKWTVDCSCGAKDDDGERMLSCDSCHVWQHTRCIGISDFDQVPKRYVCASCK
LVHKSKMYSSFPNKRCKTGSFSHASGGSWRPHIS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcacgggcggcccacgaagcgggcgcggcgcgggcgggtgctggcggagccc
ggcctcctcgacctgagggccttccccggccggaaggagcgggcgggccccgcgtcgttc
cgcgccggcgtgcgcgggttcctgtcccggcacgcggcgccggcggcggagtgggagcag
ggggccgtgctgggcgacgccggcgcggtgtggcaggtaggcttccgcgtgggcggcgag
gagggcgaggcctcagtcgtggtcatggacgtggtcgaggaggacgtgcccagggccagg
cgcgtccactgtgaccactgtaccgttgctggctggagcaggcaccctgtttgtgggaag
aagtatcacttcataattcggaatgagaaaatgcccagctgcaaaacctgctggcgttgt
ggcctgatggttcaattgtttgagacaaggtgcccggcgtgcactcatggttctgggtta
tcccatgatgaatctgaagattgggattatcttcagattgacgatccgcggcatttgctg
catggcatggttcatgaaaatgggtttggccaccttgtacgaattaatggtcatgaaggt
ggctccagcctcttgacaggataccaactaatggacttttgggatcgtctttgcacatac
ctaagagttagaaaggtttcagtgttggatgtctcgaagaagtttgaagttgactatcgg
gttctaaatgctgttgccactggctgttcttggtatgggcagtggggattcaaactagga
agtgggagctttggaattacatctgaaacctactgcaaagccattgaaaacctttcatca
gtgtcactctctcacttctttccacactcccgatatcctcgaaaccaactgcaggatacc
attgctttctatcaatccctctcaaaacgccctcttgtcacattccgtgatctgtttctc
tatgtcttgggccttgctgctagcaaaaatgtacatacccaccccgtgacaatgcacaaa
agggagctagcacatgatgccgatttgaaagatgggaactgggctgatgagaaaataaag
caagccatggatgttgcgctgaaagttctccgtgctgcagataggtgggtggctgtgcga
accttaaaggcagctacagctcatccaattggttcaccacagctggttgattactgcatc
aagaccattgttggtacaagaacctatgatgggatgattgttgtagttcgatgcaacagt
gagacaaacacaatagagtacaggctcacaaatgaaatcttgccaccaaagaatgttagc
atgccaactcgtgaacaccttcgccgtgacatcaagttcctctatgacgctctcctcttc
cgtcatacaatgcaaccttataagccagaacaaattcacgaacatgccaagagacatgca
acgatccttttggactgtaaacaattcatcaagcattatgacctggaagaggatttctta
cctcaaaacaattctgtgttgcacatctggtgccaagtggagctattggatcaggctggt
gatccacccagcctcccagcagaacttttaacacttccgcaaacagctactgttggtgat
ctgaagatggaggctacgagaacattccgaagcatctacttgatgctacaaagctttgta
gcaaaccagcttcttgattgttcaactgcagatgacacaactcaagtcaagctcttattt
ggagaaaaagggagtgtcagcatccaaggcaagtgtgttggaggcgagcgcagggttgcc
atttatcggatggagaggggtgtggacaaatggacagttgattgttcatgtggagcaaag
gatgatgatggtgagaggatgctatcttgtgactcatgccatgtgtggcagcacactagg
tgtattggaattagtgattttgatcaggtgccaaagagatatgtatgtgcatcttgtaaa
ttagtccacaagtctaagatgtatagtagtttccctaacaaaagatgtaagactggctct
tttagtcatgccagtggtgggtcgtggaggccccacatcagttaa
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