KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123448046
Entry
123448046         CDS       T11213                                 
Name
(RefSeq) signal recognition particle 54 kDa protein, chloroplastic-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03060  Protein export
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    123448046
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hvg02044]
    123448046
Enzymes [BR:hvg01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     123448046
Secretion system [BR:hvg02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   123448046
  Eukaryotic Sec-SRP protein
   123448046
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 cobW ParA ArsA_ATPase AAA_17 APS_kinase 6PF2K AAA_33 AAA_18 AAA_16 DUF6779 nSTAND3 AAA_30 AAA_19 ResIII DUF4398 NTPase_1 AAA_31 ATP_bind_1 NPHP3_N AAA_26 AAA_24 Thymidylate_kin AAA
Other DBs
NCBI-GeneID: 123448046
NCBI-ProteinID: XP_044980749
UniProt: F2CSD0
LinkDB
Position
4H:108676024..108681988
AA seq 554 aa
MEATTTLTLSSSPAIAARRSPVRATISQSHLRHCPVRTSRLHVAQSLASRPLSSGWRWRR
RGSGLVVRAETFGQLTTGLESAWNKLRGVDVLTKETIVEPMRDIRRALLEADVSLPVVRR
FVSSVSEKALGSDVIRGIRPEQQLVKIVHDELVQLMGGEVSDLVFAKTGPTVILLAGLQG
VGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTVLGEQVGVPVYSEGTTAKPAEI
TKNAMEEAKRNNIDAIVVDTAGRLQIDKTMMVELKEVKKSVNPTEILLVVDAMTGQEAAA
LVTTFNIEIGISGAILTKLDGDSRGGAALSVKEVSGKPIKFVGRGERMEDLELFYPDRMA
QRVLGMGDVLSFVEKAQEVVRQEDTTELQKKIMSAKFDFNDFLKQTQNVAKMGSMSRVIG
MIPGMNKVTPAQIREAEKRLAFVESMINAMTAEEKEKPELLAESRERRIRVAEESEKTEQ
EVSQLVAQLFQMRAQMKKLMGMMQGQEAIAGMGDLMDSLNADEKAPPGTARRRRRRSEPP
RQRELDAVGGASRP
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggaggccaccactacactcacgctctcctcgtcccctgccatcgcggcccgccgctcg
ccagtgagggcgaccatctcccaatcccacctccggcattgccccgtccgcacttcgcgc
ctccacgttgcccagagcctggcctcacgtcccctctcctcggggtggcggtggcggcgg
cgggggagcgggctggtggtgcgggcggagacgttcgggcagctcaccaccgggctcgag
tccgcgtggaacaagctgcgtggcgtcgatgtgctgacgaaggaaaccattgtggagccg
atgcgggacatcagaagagcgcttctggaagcagatgtcagtttgccggtcgtcagacgg
ttcgtgtcgtctgtgagcgagaaggctttaggttcagatgttatccgaggaatccgaccg
gagcagcaattagtcaagattgtgcatgatgaacttgttcaactgatgggtggagaggta
tcagacttggtgttcgcaaaaactggcccaacggtcatcctactggcaggtctgcaaggt
gttgggaagacaactgtctgtgcaaaacttgcattctatctgaagaaactggggaagagt
tgtatgctggtcgctgcagatgtttacaggcctgctgccattgatcaactcactgtactg
ggtgaacaggtgggtgtgccagtttactcagaaggaaccacagcaaaacctgcagaaata
accaagaatgccatggaagaggcgaaaagaaataatattgatgcgatcgtagtggatact
gctggcagactgcagattgataaaacaatgatggttgaattgaaagaagtaaagaagtct
gttaatcctacagagattttgcttgttgttgatgccatgactggccaggaagctgcagca
ttggtcacaaccttcaatattgaaattggtatatccggtgctatattgactaaattggat
ggtgattccaggggtggagcagcacttagtgttaaagaggtgtctggaaagcccatcaag
tttgtagggagaggagagcgaatggaggaccttgagcttttctatcccgaccgcatggca
caacgtgttttgggaatgggagatgtcctttcatttgttgaaaaagcacaagaagtcgtt
cgtcaagaggataccacggaactgcagaagaagatcatgagtgcaaaatttgacttcaat
gacttcttaaaacagacacaaaatgttgccaaaatgggatccatgagccgtgtaattgga
atgattccaggcatgaacaaggttactcctgcgcaaattcgggaagccgagaaaagactt
gcattcgtagagtcgatgattaatgcaatgacagccgaggaaaaggaaaaacctgagttg
ctggctgaatcacgcgagaggaggattcgggtagctgaggagtccgagaagacagaacaa
gaggtgagccaactggttgcacagctcttccaaatgcgcgcgcagatgaagaaattgatg
ggtatgatgcaagggcaagaagcaattgcaggaatgggagatctcatggactcgcttaac
gcggacgagaaggcacctcctggcaccgcacggaggaggagacggcggagtgagccgccg
cggcagagggagttggatgcagtgggtggcgccagtaggccttga

DBGET integrated database retrieval system