KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123448047
Entry
123448047         CDS       T11213                                 
Name
(RefSeq) signal recognition particle 54 kDa protein, chloroplastic-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03060  Protein export
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    123448047
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hvg02044]
    123448047
Enzymes [BR:hvg01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     123448047
Secretion system [BR:hvg02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   123448047
  Eukaryotic Sec-SRP protein
   123448047
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA ParA CLP1_P cobW NTPase_1 APS_kinase ArsA_ATPase AAA_17 MeaB nSTAND3 6PF2K AAA AAA_16 AAA_18 AAA_31 AAA_30 AAA_33 MMR_HSR1 ResIII AAA_19 NPHP3_N GTP_EFTU KAP_NTPase CLZ PIF1 Thymidylate_kin ATP_bind_1 ATPase
Other DBs
NCBI-GeneID: 123448047
NCBI-ProteinID: XP_044980750
UniProt: A0A8I6XY80
LinkDB
Position
4H:complement(108684082..108698141)
AA seq 554 aa
MEATATLTLSSSPTGARRLPARPAAASLHLRRVPDLSFRLRGAQGPAAFRALSSPFPGCR
RRRRGSGMVVRAEMFGQLTTGLESAWNKLRGVDRLTKENIAEPMRDIRRALLEADVSVPV
ARSFIESVTEKAVGTDVIRGVQPEQQLVKVVNDELVQLMGGEVSDLVFAKTGPTVILLAG
LQGVGKTTVCAKLAFYLKKMGKSCMLVAADVYRPAAIDQLTILGKKVGVPVYSEGTEAKP
SEIAKNGLKEAKSKKTDVVIVDTAGRLQVDKAMMNELKEVKKAVKPTEVLLVVDAMTGQE
AAALVGAFNVEIGITGAILTKLDGDSRGGAALSIKEVSGKPIKFIGRGERVEDLEPFYPD
RMAQRILGMGDVLSFVEQAQQVMNQEDAEELQKKIMSAKFNFNDFLKQTKAIAQMGSFSR
IIGMIPGMNKVTPAQIREAEKNVKFMESMINVMTADERERPELLAESRERRRRVAKDSGK
TEQQVSQLVSQLFQMRTRMQKMMAGMQGKDTPDMETLAESIKSEEQAAVGTGKRRRKYGN
LRQRDLDSMRGYRR
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggaggccactgccacactcacgctctcttcgtctcccaccggcgcccgccgcttgccg
gccaggcccgccgcggcctcccttcacctccgccgcgtgcccgatctctccttccgcctc
cgcggggcccaaggtcccgctgccttccgcgccctctcttccccattcccgggatgcagg
agaaggaggaggggaagcgggatggttgtgagggcggagatgttcgggcagctcaccacc
gggctggagtctgcgtggaacaagctgcgaggcgtcgatcgactgacaaaggagaatatc
gctgaaccgatgcgggatattagaagagcacttttggaggcagatgtaagtgtgccagta
gcaagaagttttatcgagtccgttactgaaaaggctgtaggcactgatgtgatccggggt
gtccaacctgagcagcagttggtgaaggttgtgaatgatgaacttgtacaactgatgggt
ggagaggtgtcagatttagtatttgcaaaaactggcccaacggttatcctattggcaggt
ctgcaaggtgttgggaaaactaccgtctgtgctaagcttgccttctatctgaaaaagatg
gggaagagttgtatgctggttgctgcagatgtttacaggcctgctgctattgaccaactc
actattctgggtaaaaaggttggtgtaccagtttactcagaaggaacggaagcaaaacct
tcagagattgccaagaacggtttgaaagaagcaaagagcaagaagaccgatgtagttata
gtggatactgctggaagattgcaggtcgataaagctatgatgaatgagttgaaagaagta
aagaaggcagtgaagcctacagaagttcttcttgtggttgatgctatgactggccaagaa
gctgcagcattggtcggcgccttcaatgttgaaattggtataactggtgctatactgaca
aaactggatggtgactccagaggtggggcagcactaagtatcaaagaggtgtctggaaag
cccatcaaattcataggccgaggagaacgtgttgaggatcttgagcctttctatccagat
cgtatggcgcagcgtatcttgggaatgggagatgtactttcatttgttgagcaagcacaa
caagtgatgaatcaagaagatgctgaggaattacagaagaagattatgagcgcaaagttt
aacttcaatgatttcttgaagcaaacaaaagctatcgcgcaaatgggttcgttcagtcgt
ataattggcatgattccaggcatgaacaaggttactccagcacaaatccgtgaagctgag
aaaaacgttaagtttatggagtcaatgatcaatgtgatgactgctgatgagagggaaaga
ccagagttacttgctgagtcgcgcgagaggaggagaagagtggctaaggactctggaaag
acagaacagcaggtaagccaactagtatcacagcttttccaaatgcgcactcggatgcag
aagatgatggctggcatgcaaggaaaagatacacccgacatggaaactctcgcggagtcc
atcaaatccgaagaacaggctgccgtgggtactggaaagcgcaggaggaagtacggcaac
ctgaggcagcgggacctggactcgatgcgtggttaccgccggtga

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