Hordeum vulgare subsp. vulgare (domesticated barley): 123448224
Help
Entry
123448224 CDS
T11213
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1.1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00750
Vitamin B6 metabolism
hvg01100
Metabolic pathways
hvg01240
Biosynthesis of cofactors
Module
hvg_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
123448224
Enzymes [BR:
hvg01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
123448224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NanE
NMO
Motif
Other DBs
NCBI-GeneID:
123448224
NCBI-ProteinID:
XP_044980987
UniProt:
F2DUQ7
LinkDB
All DBs
Position
4H:153140215..153141530
Genome browser
AA seq
314 aa
AA seq
DB search
MASDGVVALYGNNKAVVEPTAKPAAATFSVKVGLAQMLRGGVIMDVVTAEQARLAEEAGA
CAVMALERVPADIRAQGGVARMSDPALIRDIKRAVTIPVMAKARIGHFVEAQILEAIGVD
YVDESEVLTLADDAHHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVE
AVRHVRSVMGAVRALRNMDDDEVFSYAKQIAAPYDLVMQTKQLGRLPVVQFAAGGVATPA
DAALMMQLGCDGVFVGSGIFKSGDPSRRARAIVQAVTHYSDPEILANVSAGLGEAMVGIN
LSDPNVERFAARSQ
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgacggtgttgtggccctgtacggcaacaacaaggcggtggtggagcccacc
gccaagcctgccgccgccaccttctccgtcaaggtgggtctcgcccagatgctgcgcggc
ggcgtcatcatggacgtcgtcaccgccgagcaggcgcgcctcgccgaggaggccggtgcc
tgcgccgtcatggcgctggagcgcgtgcccgctgacatccgcgcccagggcggcgtcgcc
cgcatgtccgacccggccctcatccgcgacatcaagcgcgccgtcaccatcccagtcatg
gccaaggcccgcatcggacacttcgtggaggcccagatcctggaggccatcggcgtggac
tacgtggacgagagcgaggtcctcaccctcgccgacgacgcccaccacatcaacaagcac
aacttccgcgtccccttcgtgtgcggctgccgcaacctcggcgaggcgctccgccgcatc
cgcgaaggcgccgccatgatccgcaccaagggcgaggccggcaccggcaacgtggtggag
gccgtccgtcacgtccgctccgtaatgggcgccgtccgcgccctacgcaacatggacgac
gacgaggtcttcagctacgccaagcagatcgccgccccgtacgacctggtgatgcagacc
aagcagctcggccgcctcccggtcgtacagttcgccgccggaggcgtcgccacccctgca
gacgccgccttgatgatgcagctcggctgcgacggggtcttcgtcggctccggcatcttc
aagagcggcgacccgtcgcgtcgcgcccgcgccatcgtccaggccgtgacacactacagc
gacccggagatcctggcgaatgtcagcgccgggctaggggaggccatggtggggatcaac
ctgtccgaccccaacgtggagcgcttcgccgcccgatcccagtag
DBGET
integrated database retrieval system
