KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123448354
Entry
123448354         CDS       T11213                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04144  Endocytosis
hvg04145  Phagosome
hvg04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    123448354
   04145 Phagosome
    123448354
   04148 Efferocytosis
    123448354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hvg04131]
    123448354
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hvg04147]
    123448354
   04031 GTP-binding proteins [BR:hvg04031]
    123448354
Membrane trafficking [BR:hvg04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    123448354
Exosome [BR:hvg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123448354
  Exosomal proteins of other body fluids (saliva and urine)
   123448354
  Exosomal proteins of colorectal cancer cells
   123448354
  Exosomal proteins of bladder cancer cells
   123448354
GTP-binding proteins [BR:hvg04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    123448354
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase AAA_16 AAA_22 Septin cobW nSTAND3 AAA_7 AAA_5 AAA_24 NTPase_1 PduV-EutP ATPase_2 NACHT AAA TniB nSTAND1
Other DBs
NCBI-GeneID: 123448354
NCBI-ProteinID: XP_044981135
UniProt: A0A8I7B3Y5
LinkDB
Position
1H:complement(487484490..487487028)
AA seq 208 aa
MAMAPRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFLTKEVLIEDRLVT
LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNAKRTFNTLGTWHDEFINQAGPSDPKQF
PFILVGNKVDLDSGSRRVVPEKKAKDWCVAKGDIPYFETSAKDDCNVDTAFLCIAKLALE
HEHDQDIYFNSVAEQGPKPEGQTSGCAC
NT seq 627 nt   +upstreamnt  +downstreamnt
atggcgatggcgccgaggaggcggacgctgctcaaggtcatcgtcctcggcgacagcggg
gtcgggaagacgtcgctgatgaaccagtatgtgaacaagaaattcagccagcagtacaag
gcgaccatcggcgccgacttcctcaccaaggaggtcctcatcgaggacaggctcgtcacc
ttgcagatatgggatacggcagggcaggagaggttccagagcctcggcgtggccttctac
aggggagccgactgctgcgtgctggtctacgacgtcaatgccaaaagaaccttcaatacg
ctcggtacctggcacgacgagttcatcaaccaagctggcccatcagacccgaagcagttt
cccttcattttggtcgggaacaaggtcgatctggactctgggagcagacgagtggttccc
gagaagaaagcaaaggactggtgcgtcgccaagggcgacattccctactttgaaacctcg
gccaaggacgactgcaatgtcgacactgctttcctgtgcatcgccaagcttgccttggag
catgagcacgatcaagacatctacttcaattcagttgcagaacaaggccctaaacctgaa
ggacagacgagcggatgcgcgtgctag

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