Hordeum vulgare subsp. vulgare (domesticated barley): 123448440
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Entry
123448440 CDS
T11213
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123448440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvg03021
]
123448440
03036 Chromosome and associated proteins [BR:
hvg03036
]
123448440
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123448440
Coactivators
SAGA/TFTC/STAGA complex
123448440
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
123448440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
123448440
NCBI-ProteinID:
XP_044981265
UniProt:
A0A8I7BC31
LinkDB
All DBs
Position
4H:complement(235383806..235440818)
Genome browser
AA seq
847 aa
AA seq
DB search
MDPIMKLLEDDEEDESMHSGADVEAFTAALNREVEGSASSSSAAGGSSFQPLDRAAGTLP
QKSNPVVNNSHGQWQGSVKNDIGNQESQQHEEKHLYCKKEKSSGPEAIPIDADNKQLHSN
TQIECLQLKVKQEPGNNAQQSTVGQQQPMQQIKSQQPPGTNQSNSPAMVGKPPVVTFHML
IPILRRYLDKDRDIQVQSIFAKLRKNEVSKEHFLKVIRTIVGDKLLKQAASQYQMQAAQA
QRNPLANPSNYSISSQVPDQQNEGPRLPQFRPSSSGQLQSNMGYAASEGNLQKPNETGNM
SDRKGLQMLQSRPPNIHSIPMQATQDHVQRPHTFLPALGANSIHSRQFPHSVGGPIAPLR
PQMTDSSQRGQSVQGGVASVLSSVATGPALQNNQTSQQQPNKEQKTNSFTPTVHMNKETA
NQPSESAQSSFAALNAKQVNPGLVSSKVGGVLENQSSMLATPKPLTTTSSSQPHPSYGTP
SELNMQIQPSTQAPPSGAASKTPQKKPSAGQKKPLEAIGSSPLPSGKKQKGSGGFHDQSI
DQLNDVTAVSGVNLREEEEQLFSAPKEESRVSEAARKVVQLEEERLILQKGPLTKKLAEI
MRKYNLKSIGCDVERCLSMCVEERLRGFISNTIRLSKQRVDVEKSRHHYYPLSSDVRSHI
LRVNREAREQWDRKLVVDANRIRKQSDGDDNSVISSEKDKAESRGTSKHAKTYKEEDDKM
RTTAANAAVRVAAGGDDMLSKWQLLAEKNKLRGEGGDSYSDSLPGTMSPHKLSPKAGKGS
REQHEIEKRGYFSILGPGGVRRSAHMKVVRSITVKDVVAALEREHQMSKSSLLFRLHGRQ
PTEPAAK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggatcccatcatgaagctcctcgaggacgacgaagaggatgagagcatgcactcgggc
gccgacgtcgaggccttcacggcggcgctgaaccgcgaggtcgagggcagcgctagcagc
agcagtgccgccggcggctcctccttccagccgctggatcgcgccgctggtacattacct
cagaaaagcaacccagtagtaaacaacagtcatggacagtggcaaggttcagtaaagaat
gacattggaaaccaggagagccaacagcatgaagaaaaacatctatattgcaaaaaagag
aagtcatccgggcctgaagcaatccccatagacgctgataacaaacaacttcactctaat
actcaaattgagtgtttacagctaaaggttaagcaggagccaggaaacaatgctcaacaa
agcactgttggtcagcagcagcctatgcaacaaataaagagtcaacaaccaccaggcaca
aaccaatccaatagtccagctatggtgggaaagcctcctgtagttacatttcatatgcta
atcccgattttgagacgctaccttgacaaggacagggatatacaagttcagtccattttt
gcaaagttacggaaaaacgaggtcagcaaggaacattttttaaaggttattaggactatt
gttggtgataagttgctcaagcaagctgcttcacaatatcaaatgcaggctgctcaggcg
caacggaatcccctggcaaacccaagcaattattctatttcaagtcaagtcccagatcag
caaaatgagggcccaagactgcctcaatttcgaccatcctcatcaggccaattgcagagt
aacatgggttatgcagcttcagaaggcaacttacaaaagcctaatgaaactggtaacatg
tcagataggaaagggttgcagatgctacaaagccgtccacctaatatccactcaatccca
atgcaagcaacacaggatcatgtgcagcgtccacatacatttttgccagccttaggggca
aatagtattcattctcgtcaatttccacattcagttggaggtccaattgcgccacttaga
ccgcagatgacagattccagtcaaagaggacaatcagtccagggaggtgttgccagtgtt
cttagcagtgtggccacagggccagcattgcaaaataatcaaacttcacagcaacaacca
aacaaggagcagaaaactaattctttcactccaacagtacatatgaacaaagaaactgct
aaccaaccctctgaatccgcacagagctcttttgccgccttgaatgcgaaacaagtcaac
ccaggccttgtatcttcaaaggttggtggtgttttggaaaatcaatcatctatgttggcc
actcctaaacctttgacaacaacaagctcaagtcaacctcatccatcttatggaactcca
tccgaacttaacatgcagattcaacctagtactcaagcacctccttctggagcagcttcc
aaaacacctcaaaagaagccatctgctggacagaagaaacctttggaagcaattggctca
tcccctctaccatctggcaaaaagcagaagggatctggaggcttccatgatcaaagcatt
gaccagctgaatgatgttactgcagttagtggtgttaatctgagggaagaggaggagcaa
cttttctctgctcctaaggaagagagtcgagtttcagaagctgctcgtaaagttgtacaa
ctggaagaagaaaggctcattctacagaaggggcctctgacaaagaaattagcagagatc
atgagaaaatataatctgaagagcataggatgtgacgtagagcgttgtctatcgatgtgt
gttgaggagcggttacgaggattcataagcaatacaataaggctttcaaaacagagggtt
gatgttgaaaaatcaaggcatcattattatcctttatcttcggatgttcggagtcacata
ctgagggtgaaccgggaagctagagaacagtgggacaggaagctggtggtagatgccaac
agaatcaggaaacagagtgatggagatgacaattcagttatttcttcagaaaaggacaag
gctgagagccgtggaacatcaaagcatgctaagacttacaaggaggaagatgataaaatg
agaacgacagctgcaaatgctgctgtgcgagttgcagcagggggagatgacatgctttca
aagtggcaattgctagctgaaaaaaataaactgagaggtgaaggaggcgatagttattct
gactcactgccaggtaccatgtcgcctcacaagctttcaccaaaagctggaaagggctca
agagaacagcatgaaattgaaaagcgaggctatttttcaattcttggacctggtggcgtt
agaaggtcagcacacatgaaagtggtgcgtagcatcacggtgaaggatgtggttgcggca
cttgagagagagcatcagatgtcaaaatcatctttgctattccggttacacgggagacag
ccgacagaaccagctgcgaaatag
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