Hordeum vulgare subsp. vulgare (domesticated barley): 123448524
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Entry
123448524 CDS
T11213
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123448524
Spliceosome [BR:
hvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123448524
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GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
123448524
NCBI-ProteinID:
XP_044981379
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Position
4H:293849768..293861546
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AA seq
476 aa
AA seq
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MSSSGGGGAGQQFRYTQTPSKVLHLRNLPWECTEDELVELCRPFGRIVNTKSGVGANRNQ
AFVEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNKSPGETAGNVLLVTI
EGVQASDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDPPTASAAREALDGRSIP
RYLLPDHVVSCHLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGADGR
RVEAEGNVLLASIENMQYAVSVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPGIRLRG
HGIHHFFKTDIQGYSRMQVLLQLRRKHWKGIASTMVATAHSDKSKDYTIPEGAQQAAPQP
AGVPPTTAGWQGNSQAAGPYGPPGVAVQNQNTNRQVPNWNPGNSGYPPAPGQYPGHMYSA
PPQHYMTTSGGFSAPPPPPPHEMHPLHQMSPTHHGNQQRPASGAPGTGQPPPYYQH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtccggcgggggtggggctgggcagcagttccggtacacgcagacgccgtcg
aaggtgctgcacctgcggaacctgccctgggagtgcaccgaggatgagctcgttgagctc
tgcaggcccttcggccgcatcgtcaacaccaaatccggcgtcggcgccaatcgcaaccag
gccttcgtcgagtttaccgatgttaatcaagccatttcaatggtttcttattttgcatca
tcttcagaaccagcacaaattcgaggcaaaactgtttacattcagtattcaaatagacaa
gaaataattaacaacaagagccctggtgagactgctggaaatgtgttgcttgttaccata
gagggtgttcaagctagtgacgtcaccatcgatgtaatccatttggttttctctgctttt
ggatttgttcacaaaatagctacttttgagaaggctgcaggttttcaggcactgatccag
tatactgatccacccactgcatcagcagcaagagaagccttagatggaagaagcatccca
agatacttgcttccggatcatgtagtatcctgccacttgcggatttctttctctgcgcac
aaggatttgaacatcaagttccaatcacaccgcagcagggattacaccaacccttacctt
ccagtcaactcctctgctatagatagtacattgcagcctgctgttggtgctgatggaagg
agggtggaggccgagggtaatgttcttcttgcatcaattgagaatatgcagtatgctgta
tcagtggatgttctccatactgtgttctctgcattcggtacagtccagaaaattgctatt
ttcgagaagaacggtggaacacaagctctaatacaataccctgggatacgactacgtgga
catgggatacatcattttttcaaaacagacattcagggatacagcaggatgcaagtactg
ctacaattgcgaaggaagcattggaagggcattgcatctacgatggtggctactgctcat
agtgacaagagcaaggattacacaatcccagaaggagcacaacaagcagcaccacagcca
gccggtgtaccacctacaactgcaggatggcaaggtaattctcaagcagctggaccatac
ggaccacccggtgtcgctgttcaaaaccagaacaccaacagacaagtgccaaattggaat
cctggtaactcagggtacccaccagctccaggccagtatccaggccatatgtactcagct
ccaccacagcattacatgacaacatcagggggcttttccgcccctccgccaccgccgcct
catgagatgcatcctttacaccagatgtcacctactcatcatggaaatcagcagagaccg
gcaagtggtgcccctggaaccggccaaccgcctccgtattaccagcattaa
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