Hordeum vulgare subsp. vulgare (domesticated barley): 123448527
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Entry
123448527 CDS
T11213
Name
(RefSeq) adagio-like protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123448527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123448527
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123448527
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_2
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_1
PAS_9
Kelch_6
NANM
F-box-like
PAS
PAS_3
PAS_4
F-box
PAS_8
Motif
Other DBs
NCBI-GeneID:
123448527
NCBI-ProteinID:
XP_044981385
UniProt:
F2DIX8
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Position
4H:295518533..295523810
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AA seq
626 aa
AA seq
DB search
MFDGVDRGALVTVKRMRLCAMEEDEEEVGMEVDGEEEEEGTGGWAWGAPGLGMAGQPGEQ
RAAAIVVADAVEPDFPVIYVNAAFEAATGYRAHEVLGRNCRFLQFREPRAQRRHPLVDPM
VVSEMRRCLSDGIEFQGELLNFRKNGAPVNNRLRLIPMHGDDGAFTHIIAIQLFSDANID
PSNISYPIYKPQSSHRLSIQDMNRASHETSPKVQCSEYCAIFQLSDEVLAHNILSRLSPR
DVASVGSVCTRMHLLTKNDLLRKMVCQNAWGRDVTGRLEMSTKMLGWGRLARELTTLEAA
SWRKFTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMSDTFVLNLDAPKPEWCRVKV
SASPPGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAQTPAWREIASDGPPLPRS
WHSSCTLDGSKLVVSGGCAESGVLLSDTFLLDLTKEKPAWKEIPTSWSSRLGHTLSVYGK
TKIFMFGGLAKSGSLRLRSSDAYIMDVGEENPQWRQLATTVFPSGCPPPRLDHVTVSLPC
GRIIIFGGSIAGLHSPAELFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTRVLVL
GGHSGEEWILNELHELCLASRPDEDG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatggggtggatcgcggcgccctcgtgacggtcaagcggatgaggctgtgcgcc
atggaggaggacgaggaggaggtggggatggaggtggacggggaagaggaggaggagggg
accggtgggtgggcctggggagcgccggggctggggatggcaggccagcctggagagcag
agggcggcggcgatcgtggtggcggacgcggtggagccggacttccccgtcatctacgtc
aacgccgccttcgaggccgctacggggtaccgcgcgcacgaggtcctcggccggaactgc
cgattcctacaatttcgggagccacgtgcccaaagacggcatccccttgtcgatccaatg
gttgtttcagagatgcgacgatgcctcagtgatggaattgaattccaaggtgaactactg
aattttcggaaaaatggagctccagtaaacaaccgattgaggctgattccaatgcatggg
gatgatggagcttttacacacataattgcgatccagttgttctctgatgctaacatcgat
cccagcaacatatcttacccaatatataaaccacagtccagccacaggctcagcatacaa
gatatgaatcgagcttctcatgaaactagtcctaaagtccaatgttcagaatactgcgct
atcttccaactctcggatgaagttctagctcataacattttatctcgcctgtcaccaaga
gatgtagcttcagttggatcagtctgcactagaatgcatctgctgaccaagaatgatctt
ctgagaaaaatggtttgccaaaatgcatggggaagagatgtcactggcaggcttgagatg
agcacgaagatgttaggatggggtcgtcttgcaagagagctaacaactctcgaggcagcc
tcttggaggaagttcacagttggaggacgcgttgagccatcccgatgcaattttagtgcc
tgtgctgtgggcaaccgcctcgtcctttttggcggggagggggtcaacatgcagcctatg
agtgacacctttgtgcttaaccttgatgctccaaagccagaatggtgccgtgtcaaggtt
tctgcctcaccacctggccgctggggacatactctctcatggctaaatggctcatggctg
gtagtatttggaggttgcgggcagcaaggtttgcttaatgatgtcttcgtccttgatctt
gatgctcagactcccgcttggagggagattgctagcgacggtccgccactgccacggtct
tggcatagttcatgcaccctggacggttctaaacttgttgtgtcaggggggtgtgccgag
tccggtgtgctcctaagcgacacattcctgcttgacttgacgaaggagaagccagcatgg
aaggagatcccgacatcctggtcatcccgccttggccataccttgtctgtttatggtaag
actaaaatatttatgtttggtggattggcaaagagtggctcgctccgactgcgctccagt
gatgcctacataatggatgttggtgaagagaatccacaatggaggcagttggcaacaact
gtgtttccaagcggttgtccaccaccaaggcttgatcatgtcaccgtgagcctgccctgt
ggaaggatcatcatatttggcggctcaatcgctgggctgcactcacccgctgagctcttc
ttgcttgatccggctgaggaaaaaccgacatggagaatcctgaacgtcccggggcagcca
cccaagttcgcttggggacacagcacctgcgtggttggtggcactagggtcttggttctt
ggtggacacagcggagaggagtggatcctgaatgagctccacgagctctgcctcgcaagc
aggcccgacgaagatggatga
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