Hordeum vulgare subsp. vulgare (domesticated barley): 123448569
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Entry
123448569 CDS
T11213
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123448569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123448569
Membrane trafficking [BR:
hvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
123448569
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
TopoV_HHH
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
123448569
NCBI-ProteinID:
XP_044981449
UniProt:
F2E1J6
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Position
4H:complement(325968961..325985558)
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AA seq
782 aa
AA seq
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MAADPSAAAAPADPDGPDAVRFTWNAWPRSKVEASRCVVPLAAAISPVRSPESLASPPLP
YPPLRCKPPCSALLNPFARVDFAAKIWICPLCFSRNHFPPHYAGISENNVPAELFTQCST
VEYLVAAPPGSPAPLPPVFLFVIDTCVIEEELEYVKLSMRKAVALLPEHALVGLVTFGTQ
VHLHELGFSELSKIYVFRGSKEISKEQILDQLGLSVGGRPGFPKMTQQPGVQQVNVMHPL
ATTGVNRFLLPVSECECTLSTLLDELQPDQWPVEAGNRAIRCTGVALNVAAGLLGACLPG
TGARIIALLGGPCTEGPGVIVSKDLSEPVRSHKDLDKDAAPHFQKAVKFYDGLAKQLVSQ
GHVLDVFASALDQVGLAEMKLAIERTCGLVVLSESFGHSVFKDSFKRIFEGGEHSLGLSF
NGTFEINCSKDIKVQGVIGPCTSLEKKGALCADTIIGQGSTTAWKMCGLDRNTSLTVFFD
VSPSERSGQPGHQNPDLYIQFVTSYQHPEGQMRIRVTTVSRKWVDGSTNTEELVEGFDQE
TAAVVLARYISLKMEIEEEFDATRWLDRSLIRLCSRFGDYRKDDPSSFSLHSNFSLFPQF
MFNLRRSQFVQVFNNSPDETAYFRMLLNRESITNSVAMIQPSLISFSFDSPPSPVFLDVA
SIAVDRILLLDAYFSVVIFHGMTIAQWRNMCYQNQPEHQQFAQLLQAPQEEAQVIINGRF
PVPRLVVCDQHGSQARFLLAKLNPSATYNSAHDVPPGSDIIFTDDVSFQVFCEHLQRLSV
QS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacccctccgcggctgcggcgcccgccgaccccgatggcccggacgcggtc
cgcttcacatggaacgcctggccgcggtccaaggttgaagccagccgctgtgtcgtcccg
ctcgccgccgccatctccccggtccgctcccccgagtccctcgcgtcgccgccccttccc
tacccgccactccgctgcaagccaccttgctctgcgctcctcaaccccttcgcccgtgtc
gacttcgcggccaagatctggatctgcccgctctgcttctcgcgcaaccactttcccccg
cactacgccggcatctccgagaacaacgtgcccgccgagctcttcacacaatgctccacc
gtcgagtacctcgtcgccgcacccccgggatcgcctgcaccgctgccgccagtgttcttg
ttcgtcatcgacacctgcgtcatcgaggaagaactggagtacgtcaagctgtccatgcgg
aaggcggtcgcgcttctgccagagcacgcacttgtcggcctggtgaccttcgggacgcag
gtgcatctgcacgagcttgggttctccgagctcagcaagatctacgtgttccgggggagc
aaggagatctccaaagagcagattttggatcagcttgggttatcagtcggggggcggcca
gggttcccaaagatgacacagcagccaggcgtgcaacaggtcaatgtgatgcatccatta
gccacgacaggggttaacaggttcttgctcccggtatcagaatgcgagtgcacgctcagc
acgctgctggacgagttgcagcctgaccagtggcctgttgaggctgggaaccgtgccatc
aggtgcacgggtgttgcgctaaatgtggcggctgggttgcttggggcgtgcttgcctggg
actggggcaaggattattgcgctacttggtgggccatgtaccgaaggtcctggagtgatt
gtgtcaaaagatttgtcagagccagttagatcacacaaggatcttgacaaggatgcggcg
cctcatttccagaaagccgtcaaattttacgatggccttgccaaacaactggtcagtcaa
ggtcatgttctagatgtgtttgcatctgctcttgatcaggttggactagctgagatgaag
cttgctattgagagaacatgcggccttgttgtcttatccgagagttttgggcattccgtg
tttaaggattcttttaaacgcatttttgagggaggtgaacattcattgggcctgtcattt
aatggcacatttgaaataaactgttcgaaggacattaaagttcagggtgttattggaccg
tgtacatctttggagaagaaaggagctttatgcgcagacacaattatcggtcagggaagc
acaacagcatggaaaatgtgtgggcttgataggaatacttcacttacagtattttttgat
gtctcaccgagtgaacgctctgggcaaccaggtcatcaaaatcctgatttgtacatacag
tttgtaaccagttaccaacacccggaaggtcaaatgagaataagagttactactgtatcc
agaaaatgggtggatggttctaccaataccgaggaactagtcgaaggatttgaccaggaa
actgcagctgttgtgttggcaagatacatttccttgaaaatggaaatagaggaagagttt
gatgcaacacggtggctcgatagatctctcatacgtctatgttcaagatttggggattat
cggaaggatgacccctcttcatttagcctacattctaatttctcactgtttcctcagttt
atgtttaatctccggcgttcgcaatttgttcaggtttttaataacagtccagatgaaaca
gcctatttccgaatgttactcaaccgagagagtatcactaattcagttgcaatgattcag
ccgtcattaatttcattttctttcgattcacctccatcccctgtattcctcgatgtggca
tcaatagcagtagatcgtatactgctgcttgatgcatacttcagtgttgtcatcttccat
ggaatgacaatcgctcagtggagaaacatgtgttatcagaatcagccggagcatcagcaa
ttcgcacaattattacaagctcctcaggaggaggcccaggtgataataaatggtcgattc
ccagttcctagactagtcgtctgtgaccagcatggctcccaggcaaggttcttgttagca
aaactaaatccatcagccacatataattcagcacatgatgttccaccaggttctgacatc
atattcaccgatgatgtgagcttccaggtcttttgtgagcatctacaaaggttgtctgtt
cagtcgtaa
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