Hordeum vulgare subsp. vulgare (domesticated barley): 123448614
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Entry
123448614 CDS
T11213
Name
(RefSeq) chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123448614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hvg03036
]
123448614
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
123448614
INO80 complex (yeast)
123448614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
123448614
NCBI-ProteinID:
XP_044981502
UniProt:
A0A8I6XJL6
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All DBs
Position
4H:356531751..356544423
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AA seq
1496 aa
AA seq
DB search
MDPRRPSPRGVANGSGFSYSNLFNLEPLLNFKVPLPEDLDRYGNSSPNGSVSSQGQESLS
DQYNGVSDASHGLHRKRKRHLGVASDDEEADAHSNQITEEYYRTMLSEHVQKYRRSKVNE
GVFGSDPPRADTPQMIKHKNSNTRVMKCRSDFKDVAALGVVETSPEYNGMGSISAYGGFN
KIVASLDSSSLDMGDNVSYLIPEGYDKLASSLNLPVFSDIRVEEHFLNDMLDLRTLSAML
GTDRKFEATNRGGLAEPQPQHESLQERVKMQKFALQVTEDPFAIPEGSAGRIRRSIISES
GSLQVHYVKVLEKGDTYEIIERSLPKKQIVTKEHSETMKEDLASFLKRWHIIARNIPKHQ
RNFTTLLKKRQMDAKRFSENCQREVKLKVSRSLKLMRSAPVRTRKLARDMLIFWKRVDKE
QYELRKKEERDAAEALKREEELREAKRQQQRLNFLLSQTELYSHFMQNKAGESALPDEGS
ALEVDNEEDPEEAELKREAFRAAQHAVSQQKRMTNAFDSEIVRLCQSSESGIPTDDSATM
EPSKIDLLHPSTMPEQSSVQTPELFKGVLKEYQLKGLQWLVNCYEQGLNGILADEMGLGK
TVQAMAFLSHLAEDKNIWGPFLVVAPASVVNNWAEEVIRFCPDLKILPYWGPERVVLRKN
INPKRLYRRDASFHILITNYQILVNEEKLLRRVKWQYMVLDEAQAIKSSSSQRWKTLLSF
NCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIEGHAEHGGTLNEHQ
LSRLHAILKPFMLRRVKIDVIAEMTEKKEEIVPCRLSSRQQIFYQAIKNKISLNELLDGS
RGNLNDKKLLSLMNIVMQLRKVCNHPELFERNEGSYYFYFAEIPNSLLPPPFGELQDIHY
AGKRNPIVFEIPKLVYEGIICNTEIPVDGCGFRNGYINKLFNIFLPSNIHNSAVPESTSR
TTSVLPSGAFGFTRLANLSPVEASFLATCSLFERLVFSVTRCKREYVDEIMDLFLDSEGS
DLQLSQYDAAKVRAVTRLLLSPKRTDSSLLRTKLEIGLSDNPCEAPVLSHHDRLVSNIRL
LRSTYGFIPPARAPPINVCCSDRNFAYKLTDEMHDPWIKKLFLGFARTSEFNGPRIPNGH
NTLIQEVRTDLPIPQPMLQLPYRIFGSSPPMSNFDPAKMLTDSGKLHTLDKLLRQLRAEN
HRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRNFQNRNDIFVFLLSTR
AGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTIEEKILQR
AKQKNAVQELVMKGKQVQDDHLMRQEDVVSLLLDDTQIAHKLKEISMQAKDRLKKRRAKA
IKVDKEGDLKLEDLDDPTEEPVEQDHTTSKKKKSSHKKPPKSQDNDGADGDVPESGPAKD
EEHIASLMPKRSKRLVRSMGEDKEPVAASDVEKPADAAENNDSNHAEELQDQTPPA
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgccgcccttccccgcgcggcgtcgccaacggcagcggcttctcctactcc
aatctcttcaacctcgagccattgctaaactttaaggtccctttaccggaagatcttgat
cgctatgggaatagtagcccaaatgggagcgtgagtagccaaggtcaagagtccttgtcg
gatcagtacaatggtgtgagtgatgcttctcatgggctgcatcgaaagcgaaaaaggcat
cttggtgttgcgagcgatgatgaggaagcagatgcccacagtaaccaaataactgaggag
tactaccgtacaatgctgagtgaacatgttcaaaagtacagaaggtcaaaggttaatgag
ggtgtttttggttctgatcctcctcgggcagacaccccccaaatgataaaacataaaaat
agcaatacaagagttatgaaatgcagaagcgatttcaaggatgttgcagcattaggtgtg
gtagaaacctcacctgagtacaatgggatgggatctattagcgcatatggtggtttcaat
aagattgtagcttcacttgattcttcctctttggatatgggggataatgtgagctactta
attccagagggttatgataagttggcatcttccctcaatctgcctgttttttctgatata
cgtgtcgaggagcatttcttgaatgacatgctagatctgcgcaccctgtcagcaatgctt
ggcactgaccggaagtttgaggctactaatcgtggtggattagccgaacctcagcctcaa
catgaatcactccaggaaagggtgaagatgcagaaatttgcacttcaagtaactgaggac
ccctttgcaattccagaaggatcagctgggaggatacggagatctattatttcagaatct
ggcagtttgcaggttcattatgttaaagtcttggaaaaaggagatacatatgagattatt
gagcggagcttgccaaagaagcaaatagtgacaaaggaacattctgaaaccatgaaagaa
gatttggcaagttttttgaaacgctggcatattattgctagaaacattccaaagcatcaa
agaaatttcactactttgctgaagaaacggcaaatggatgctaaacgcttttctgagaat
tgtcaacgggaggtgaagctcaaagtcagcaggtcactgaaactgatgagaagtgctcca
gtacgtacaaggaagcttgctagggatatgttgatattttggaaacgggtagataaggaa
cagtatgagttgaggaaaaaggaggaaagagatgcagctgaagctttgaagcgagaagag
gaactacgcgaagcaaaaagacagcagcagaggctcaactttctgctatcccaaactgaa
ctctatagtcactttatgcagaataaggctggcgaatcagcactgcctgacgagggatct
gctcttgaggttgataatgaggaagatcccgaggaagctgaactaaagagagaggctttt
agagctgctcagcatgctgtgtcccaacaaaaaaggatgacaaatgcatttgatagtgaa
attgtgaggctttgtcaatcttcggagtctggtattccaaccgacgattccgctactatg
gagcctagcaagattgacctcttacacccctcaacaatgcctgagcagtcatctgtgcag
accccagagttgtttaaaggtgtattaaaagaatatcagctaaagggcttgcagtggctg
gtcaattgctatgaacaggggttaaatggcattcttgccgacgagatgggtcttggcaaa
actgtgcaggctatggcattcttatctcacttggctgaggacaagaacatatggggtccc
tttcttgtggttgctcctgcatctgttgtgaataattgggctgaagaggtgatcagattc
tgccctgatcttaagatactcccatattggggcccagaaagggtggtccttcgcaagaac
atcaatcccaagcgtctctaccggagagatgctagcttccacattctcatcacaaattat
cagatacttgtgaatgaagagaagcttttgagacgtgttaagtggcagtacatggtattg
gatgaggcccaggctataaaaagttcaagcagccagcgctggaagactttgctaagcttt
aactgtagaaatcgcttgcttcttactgggacaccaattcagaataacatggctgagcta
tgggcgcttcttcatttcatcatgcccactctgtttgacagccatgaacagtttaatgag
tggttctcaaaagggattgagggccatgctgaacatggagggaccttgaatgaacatcaa
cttagtcgactgcatgctatattgaagccgtttatgctccgccgtgttaagattgatgtc
atagcagaaatgacggaaaagaaagaagaaattgtgccctgcagattgagttctcgccag
caaatcttctatcaagccataaagaataagatctctcttaatgagttgcttgatggaagt
cgtgggaatctaaatgataagaagctgcttagcctgatgaatattgtcatgcagctacgt
aaggtctgcaatcatccagagttgtttgagcgcaatgagggaagctattacttctatttt
gcggagatcccaaattctcttcttcctcccccgtttggggagttgcaagatatacattat
gcgggcaagaggaatcctatagtgttcgagattccgaagttagtttatgaaggaatcatc
tgtaacacagaaatacctgtcgatggttgtggattccggaatggatatatcaacaagctg
tttaatatttttttgccgagcaatatccataattcggcagttccagaatcaacttcacga
accacatctgttctgccatctggtgcatttggttttacacgtttggcaaatctttcccca
gttgaagcttccttcctggccacgtgttcattatttgagagactagtgttttcagtgaca
cgttgcaagagggagtacgttgatgaaatcatggatctattccttgattcagaaggttct
gatctccagctcagtcagtatgatgctgcaaaagtccgagctgttactagattattgctt
tcacctaaaaggacagactccagtttgctcagaacaaaattggaaataggcctgagcgat
aacccgtgtgaagcaccagtgctttctcatcatgacaggcttgtctcaaacatacggctt
cttcgttcaacatatggttttatcccaccagctagagcaccgccgataaacgtctgttgt
tcagatcggaattttgcctacaagttaacagatgagatgcatgatccctggatcaagaag
ctgtttctgggatttgctcgcacttctgagtttaatggtcctagaataccgaatggtcat
aatactttgatacaagaagtacgtactgatttgcccatccctcagccgatgctacagtta
ccgtacaggatatttgggtcatctccgcctatgagtaatttcgatccagctaaaatgctc
acggattctgggaagctccatacgttagataaactactgcggcaactccgagctgaaaat
caccgcgtgctcctatttgctcagatgactaaaatgttggacatccttgaggactacatg
aatttcaggaaattcaagtatttcagactggatgggtcttctgcaatttctgatcgtcgt
gacatggtccggaatttccagaacaggaatgatatatttgtcttcttgctaagtacaaga
gcagggggacttggaattaatttgactgctgctgacacagttatattttacgaaattgac
tggaatccgacacaagaccagcaggcaatggatagaacacacagacttggtcagacgaag
gaggtaaccgtgtatagacttatatgcaaagacactattgaggagaaaatattgcaaagg
gcaaagcagaaaaatgcagtgcaagagttggttatgaaagggaaacaagttcaggatgat
catctgatgagacaggaggatgttgtttcattacttcttgatgatacacagattgcacac
aaattgaaagaaatatcaatgcaggcaaaggatcgactaaagaagaggcgagcaaaggcc
atcaaagtcgacaaagaaggagatttgaagcttgaagacttggatgatccaactgaagaa
cctgtagaacaagatcatacaaccagcaaaaagaaaaaaagctcgcacaagaaacctccg
aagtcacaggataatgatggtgcggatggtgatgtccccgagagtggtcctgccaaagat
gaggagcatattgcttcgttgatgcctaaaagatcaaagagactagtgaggagcatgggt
gaagataaggaacccgttgctgcttctgatgttgagaaacctgcagatgcagctgaaaac
aatgacagcaatcatgcagaagagttgcaagaccagactcctccagcgtag
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integrated database retrieval system
