Hordeum vulgare subsp. vulgare (domesticated barley): 123448690
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Entry
123448690 CDS
T11213
Name
(RefSeq) ATP-dependent DNA helicase MER3 homolog
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hvg03036
]
123448690
Enzymes [BR:
hvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123448690
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Meiosis-specific proteins
Others
123448690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
HHH_5
AAA_22
Cdd1
IMS_HHH_1
DUF4332
Motif
Other DBs
NCBI-GeneID:
123448690
NCBI-ProteinID:
XP_044981593
UniProt:
A0A8I6XCD7
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Position
4H:390218923..390232630
Genome browser
AA seq
1283 aa
AA seq
DB search
MAAMGSLGDSYELRCVSDLPPPFRPVFGFRYFNSLQSECFPVCFLSDVNMVVSAPTGSGK
TVLFELCILRLLSRFLTMEWRFNLIKGTLKTIYIAPMKALVQEKMREWKVKLGSLGINCL
EMTGDSEFFNKKAIHDSDLILTTPEKFDSMSRNGIRDGGLGFFSDIALVLIDEVHLLNDP
RGAALEAVVSRIKMLSRLGNMKSAPLANVRFIAVSATISNAEDIAEWLLAPPEGIKRFGE
EMRPVKLTTKVLGYAPAKNDFLFERRLQSFIFDILMQHSRGKSALVFCSTRKGAQEAAQC
LSQTAGSLGYSNPFMKSMQQYEHLREASLTCSDKQLQSCIVHGVGFHNGGLCLKDRSLVE
ELFLKGDLQILCTTNTLAHGINLPAHTVVIKSTQFFNKEKGSYVEYERSMVLQMCGRAGR
PPFDDTGTVVIMTRRETVHLYENLLSGCEMVESQLLPCAVEHLNAEIVQLTVSDITLAIE
WLKCSYLYIRIKKNPEHYGIKKGIPRDLLEKQMRDICIEKIHELGEYGLIWTDGDGFSLK
PLEPGRLMTKFYLKFDTMKLIVKASACCSMEDLLHIICRSAEISWIQLRRNEKKTLNDIN
SDKEGRLRFHVLSENGKKKKRIQTREDKIFVLANDYLTGDPLMHDLSLNQETNSICSNGC
RIAKCMKEYFIYKRSYRSAVNSMLLAKCLDQKLWESSLFLLKQLPGIGTVTAKALKTAGV
DSFESLATADARKLETATGRNYPFGNQIKDSLSSLPPKIDIQIEVEDAGNRQGKSTITVT
LSRQSQAVRSSKQNYFDMIVGSEEDNMILFHEKIRAQEFSSPYSVKLLVPCPQSARVTLK
VDLIFEEHVGIDIHKKHVVSREDDLHVTKAYGTEKPKPLSSLPADICSVSSRTARTIPAQ
AHIGRSPLSKEVCVIEDDDDANVPDKADNMPRTRTFNNLASLEVPSFDLMLEEDNGDMQD
VSFPEAAKAECRSASSSTIFDHIRKKSRDFPTLMLSKSMDSSYEPLILKKMKTSRDQFNL
DQGILHANEVTPMDSEHSELRVSPTNTSEKCRMILSRTSEMGRSLFAEKVYSPFEKSKSL
NRIPDENSVQFADRRGSLSEKSKSLSRIPDENSIQFAVRTDSLSEKTKILWTAPDENSHQ
FAGKRDSPSEKSKILMRPPDDGTLHFAGRRGSPSEKSNVLSRTPDETSLQFAAKRDSSSA
KSNALSKTPEVDSAQLAGRRDNPSEKNKLCSSSPFPDFQAMKQAPATVQPLRIQDYCKDI
LASSKGSGTGEPFLGFKSVFSFL
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgatggggtctctcggcgactcgtacgagctgcgctgtgtctccgatctaccc
ccgccgttccgccccgtgtttgggttcaggtacttcaactcattgcagagcgagtgcttc
ccagtgtgtttcctctcggatgtaaacatggttgtctccgcgcctactgggagtggtaag
accgtactgtttgagctatgcattctgaggctcctctcgaggttcctcacaatggagtgg
aggttcaatttgataaaaggaactctgaaaacaatctatatcgctcctatgaaggcgttg
gtgcaggagaagatgcgcgagtggaaagtgaagctgggctcgttggggataaattgcttg
gagatgactggtgatagtgaattctttaacaagaaggccatacatgattctgatttgatc
ctcaccactcctgagaagtttgattctatgagtcgtaatggaataagggatggaggattg
ggtttcttcagtgacattgctctggtccttattgatgaagttcatcttctcaatgatcca
cgtggagctgccctggaagcagtggtcagtagaataaaaatgctttctcgacttggcaac
atgaaatctgctccattggcaaatgttcgattcatagcagtttctgcaactatctctaat
gctgaggatatagcggaatggctcctagcacctcctgaaggaatcaaaagatttggagaa
gagatgcggccagtgaagttgacaaccaaagttcttggttatgctccagcgaaaaatgac
ttcctgttcgagaggaggctacaaagtttcattttcgatatactgatgcaacactcaaga
gggaagtctgcacttgttttctgttctacaagaaaaggtgcacaagaagcagcacagtgc
ctctcacaaactgcagggtctcttggctattcaaacccattcatgaaatctatgcagcag
tatgaacatctacgagaggcttccttaacctgtagtgacaagcagctgcagtcttgtatc
gtacatggagttggtttccataatggtggtctttgcttaaaggatcggagtcttgttgag
gagcttttcctgaagggtgatcttcaaattctatgcacgacaaatactttggcacacggc
atcaatttacctgcacatacagtagtgataaagtcaacacaatttttcaacaaagagaag
ggctcttatgtagaatatgagagatccatggttcttcagatgtgtgggagggctggccgt
ccaccatttgatgatactggaacagttgtaattatgacaagaagagagacagtccatcta
tatgagaaccttctcagtggatgtgaaatggtggagtctcagttgctgccatgcgcagtg
gagcacttaaatgcagagattgttcagctgacagtgtctgacataactttggcaattgaa
tggctcaagtgctcatatttatacatcaggataaaaaagaatcctgagcactacggaatt
aagaaagggattcctcgtgatctccttgagaaacaaatgagagatatatgtattgagaag
atccacgagttgggtgagtatgggctaatttggacagacggagatggtttcagtctaaaa
ccattagaacctgggaggctgatgacaaaattctatttaaagtttgacacgatgaagctt
attgtcaaagcttctgcatgttgcagtatggaagatttattgcatatcatatgccgctct
gcagagatttcttggatccaactacgtcgaaatgagaagaaaactctaaatgacataaat
tcagataaagagggaaggcttcgattccatgttctcagtgagaatggaaaaaagaagaag
cgtatccagacaagagaagataaaatatttgtattagcgaatgactatttaactggggac
cccttgatgcatgatttatccctcaaccaggaaacaaattcaatatgctcaaatggatgt
aggattgccaaatgcatgaaagaatattttatatacaaaaggagttacagatctgccgta
aattctatgctccttgcgaaatgcctagatcaaaaactttgggaaagcagtctattttta
ctcaaacaacttcctggaattggaactgttacagcaaaggcactcaagactgctggagtt
gattcctttgagagcctggcaactgctgatgctagaaagctagaaactgcaacgggacga
aattatccatttggaaatcagataaaggactccttgtcgtcattaccgccaaaaattgac
atacaaattgaggtcgaggatgctggaaacagacaagggaaatcaaccattaccgtaaca
ctaagccggcaatcacaggcagttcgatccagtaaacagaactattttgacatgattgtg
ggctcggaggaagataatatgatcctttttcatgaaaaaataagggctcaagagttttcc
agcccatattctgtaaaacttttggtgccatgcccccagagtgccagggtgactctgaag
gttgatctgatttttgaagaacacgttggtattgatatccacaagaagcatgtggtcagc
agggaggatgatttgcatgtgacaaaagcgtatgggacagaaaagccaaaacccttgtcc
agtcttcctgctgatatttgttcggttagctccaggacagctcgaacaattccagctcaa
gctcatattggacggagcccactatcgaaagaggtttgtgttatagaagacgatgatgat
gccaacgttccagacaaagctgacaatatgccgagaacgagaacatttaacaacttggct
tcactagaggtccccagctttgacttaatgcttgaagaagataatggagatatgcaagat
gtatcatttcctgaagcagcaaaagcagaatgcagaagtgccagtagcagcacaattttt
gatcacatacgcaagaaatccagagattttccaacactgatgttgtcaaagtcgatggat
agctcatatgaacctttgatactgaagaagatgaagacatcgagggaccagtttaacttg
gatcagggaatcctgcatgcgaatgaggttacaccaatggattctgaacattccgagctt
agagtctctccgaccaatacatccgagaagtgtcggatgatcctgagcagaacttcagag
atgggccgctctctgtttgcagagaaagtttacagcccatttgagaagagcaagagcctg
aatagaattccagatgaaaactctgttcaatttgctgacagaaggggcagcctgtctgag
aagagcaagagcctgagcagaattccagatgagaactccattcaatttgctgtgagaact
gacagcctctccgagaagaccaagatcttgtggacagcaccagatgagaactctcatcaa
tttgcaggcaaaagggacagcccatctgagaagagcaagatcctgatgagacctccagat
gacggcactcttcatttcgcaggcagaaggggcagcccatccgaaaagagcaatgtcttg
agcagaactcctgatgagaccagtctccagtttgcagctaaaagggacagctcatccgcg
aagagcaatgccttgagcaaaacacctgaggtggactctgctcagcttgcaggtagaagg
gacaacccgtcggagaagaacaaactctgttccagcagccccttcccagatttccaggct
atgaagcaagctccagccacagttcagcctctcaggattcaagactactgcaaggatata
ttggcgagttcaaagggcagtggaactggcgaacctttccttggtttcaagagtgtcttt
tcgttcctctga
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