Hordeum vulgare subsp. vulgare (domesticated barley): 123449014
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Entry
123449014 CDS
T11213
Name
(RefSeq) protein spotted leaf 11-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123449014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123449014
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123449014
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
U-box type E3
123449014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
Neurochondrin
KAP
zf-C3HC4_4
zf-RING_UBOX
Arm_2
zf-C3HC4_2
zf-Nse
U3snoRNP10
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
123449014
NCBI-ProteinID:
XP_044982010
UniProt:
A0A8I6XD96
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All DBs
Position
4H:complement(472944843..472954027)
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AA seq
724 aa
AA seq
DB search
MDEEAKPNTSEEASTKASAAAPAAAAVATAAEAATPPTPSGPESPEGGKEEVGDLVEKVA
ELVDEIAVISDFRNSYRRQFCNLSRRIRLLAPMMEEVKEGPRPLPEASVAALRQLRDALA
GARELLRLGSNGSKIFLVLEREKIMQTFQDITSRLEHALAGISFDELGISDEVREQVELV
HAQFKRAKERPDTSDDILFNDLISAYNSSTNDNVDPDIIQRLSEKLQLVTISDLNQESLI
LHEMASGGDPGAVVENMSMLLKKIKDFVQTQDPIGIPASTTNPSRDENLTSPVVPDDFRC
PISLDLMKDPVIVSTGQTYERGCIERWLEAGHDTCPKTQQKLPNKSLTPNYVLRSLIAQW
CEANGVEPPKRPAQPNNTPATCTASEHSKVIELLQKLSSQNLADQRGAAGMLRQLAKRSA
ENRACIGEAGAIPILVSLLPTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGIVHVL
KRGSMEARENSAATLFSLSLVDENKVTIGASGAIPALVLLLGNGSQRGKKDAATALFNLC
IYQGNKGKAVRAGLVPILLELLTETESGMVDEALAILAILSSHPEGKAAISAAAAIPILV
GVIRNGSSRNKENAAAVLVHLCNGEQQQQHLAEAQEQGIVTLLEELAESGTDRGKRKANQ
LLERMNRFLKQQSQAQGDVMAQAHVQAQTLPQAPVQAQADTQLEESLPPTSSHLLPDTDE
VNDH
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggccaagcccaacacaagcgaggaggccagcaccaaggcctccgccgcc
gcacctgccgctgctgccgtcgccactgcagccgaggcggccactccgccgacgccctcg
ggcccggagtcgccggagggggggaaggaggaggtgggagatttggtggagaaggttgcg
gagctggtggacgagatcgcggtgatctccgacttcaggaactcctaccggaggcagttc
tgcaacctgtcgcggcggatccggctgctcgcgcccatgatggaggaggtcaaggagggc
ccccgcccgttgccggaggcctcagtggccgctctcaggcagctaagggacgcgctcgcc
ggcgcccgggagcttctccgcctcggcagcaacggtagcaagatcttcctggttctcgag
agagagaagataatgcagactttccaggacattacctcgaggcttgagcatgccttagct
ggtatctcgtttgatgagcttggtatatcagatgaagtaagggaacaggttgaactggtg
catgctcaattcaaaagagcaaaagaacgaccagatacatcggacgacattctctttaat
gatctaatttctgcctataattcaagcaccaatgataatgttgacccagatatcattcaa
aggttatctgagaagttgcagcttgtcaccatatctgacctcaatcaagaatcattgatc
ttgcatgagatggctagtggaggggatcccggtgcagttgttgagaatatgtcaatgctg
ctcaaaaagatcaaggattttgtgcagacccaggatcctataggcatcccagcaagtaca
acaaacccttcccgagatgagaacttgacatctcctgttgtcccggatgattttcgttgc
ccaatatcactggatttaatgaaagacccagttattgtctccaccggccagacttacgag
cgaggttgcatagagagatggttggaagcggggcacgacacctgtcctaagacgcagcag
aagcttccaaataaatctctaactccaaactatgtactccgtagcctcatagctcaatgg
tgtgaagcaaatggtgtagagccgccaaagcgccctgctcagcctaataatacaccagca
acatgtaccgcctctgagcatagtaaagttattgagctcctgcagaaactatcatcacag
aaccttgcagatcaacgtggagctgcaggtatgcttcgtcagcttgccaagcgtagtgct
gaaaatcgtgcttgtataggagaagctggtgctattcctatccttgtgagccttctacca
actaccgatgttagcacccaggaacatgtggttactgctctcctgaatctttctatctat
gaagagaacaaagcaagaataattacctctggagctgttcctgggattgtacatgtgcta
aagagggggagcatggaggctcgggagaattcagctgccacgctatttagcctatcactt
gtggatgagaacaaggtgacaataggggcttctggggcaattccagctttggtgctgcta
ttgggtaatggaagtcaacgtggtaaaaaggatgcagcaacagcactctttaacctgtgt
atctaccagggcaacaagggtaaagctgttagagctggattggtccctatactacttgaa
cttctaacagagactgaaagtggaatggtggatgaggcccttgctatactggcaattctc
tcgagccatccagagggaaaggcagccatcagcgctgcggccgccataccaattctagtt
ggagttatcagaaatggatcctcgaggaacaaggagaatgctgcagctgttctggtgcat
ctctgtaacggcgaacagcagcaacagcatcttgcagaagcacaggagcagggcatcgtg
accttgctggaggagctagcggaaagcggcacagacagggggaaaaggaaagcaaaccag
ttactcgaaaggatgaataggttcctaaagcagcagagccaagcccagggagacgtgatg
gcacaggcgcatgttcaggcccaaaccctgccccaggctccggttcaagctcaagcagat
actcagctagaggaatcactgcctcctacttcgtctcatcttcttcctgatacagatgag
gtgaatgatcattag
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integrated database retrieval system
