Hordeum vulgare subsp. vulgare (domesticated barley): 123449140
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Entry
123449140 CDS
T11213
Name
(RefSeq) long chain base biosynthesis protein 1a
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00600
Sphingolipid metabolism
hvg01100
Metabolic pathways
hvg04382
Cornified envelope formation
Module
hvg_M00094
Ceramide biosynthesis
hvg_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
123449140
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
123449140
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hvg01007
]
123449140
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
123449140
Amino acid related enzymes [BR:
hvg01007
]
Aminotransferase (transaminase)
Class II
123449140
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Ortholog
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Gene cluster
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Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
123449140
NCBI-ProteinID:
XP_044982174
UniProt:
M0X0G4
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Position
4H:complement(498684722..498688983)
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AA seq
485 aa
AA seq
DB search
MDMALPIVNATTAVLARVSAAFNAPLARAVVFGVHIDGHLVVEGLLIAVIVFQLSRKSYK
PPKKPLSEKEVDELCDEWEPEPLCPPIKEGSNIDPPILESAAGPHTTIEGKEVVNFASAN
YLGLIGNEKIIDSCVGSLEKYGVGSCGPRGFYGTIDVHLDCEAKIANFLGTPDSILYSYG
ISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLYLSRSTVVYFKHNDMASLASTLEKLTRG
NKRTEKIRRYIVVESIYQNSGQISPLDEIVKLKEKYLFRVILEESHSFGVLGKSGRGLAE
HYGVPIDKIDIITAGMGNALATDGGFCTGSARVVDHQRLSSAGYVFSASLPPYLASAAVS
AVNYLEENPSVLANLRSNVALLHTGLSDTPGLEISSHVLSPIVFLKLKKSTGSLATDIDL
LETIAEQVLKEDSVFIVASKRSSLDRCKLPVGIRLFVSASHTELDISKACSSLKRISASV
LSDHV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcattgccgattgtcaatgccaccacggcagtgcttgctcgtgtctcagct
gcattcaacgctcctcttgcacgtgctgtcgtcttcggggttcatatcgatggtcacttg
gttgtggaaggacttcttattgccgtcatagtgtttcagctttccaggaagagctacaaa
cctccaaagaagccacttagcgaaaaggaggttgatgagctatgtgatgaatgggaacca
gaacctttatgtcctccaatcaaggaggggtccaacattgacccaccaatcttggaaagt
gctgctggaccacatacgaccattgaggggaaagaagttgtaaactttgcatcagcaaac
taccttggtttaattggcaatgagaaaattattgattcttgtgttggttcattggagaaa
tatggtgttgggtcctgtggtccacgtggcttctatggaacaattgatgtccaccttgac
tgtgaagcaaaaatagccaatttccttggaacaccggactccattctgtattcatatggg
atatctaccatattcagtgttatacctgccttttgtaagaaaggagacatcatcgtggct
gatgagggtgttcactgggcagtgcaaaatggtctctatctatcgagaagtactgttgtt
tatttcaagcataatgatatggcttcactcgctagcactttggaaaaacttactcgtgga
aacaaacgtactgagaagattagacgctacattgttgtggaatctatctaccagaattct
ggtcaaatctcccccttggatgagatagttaaattgaaggagaagtatctgttccgtgtt
attctggaggagtctcattcgtttggtgtgcttggcaagtctgggcggggccttgccgaa
cattatggtgtaccgattgacaaaattgatatcatcactgctggaatgggaaatgcatta
gctactgatggtggcttctgtacaggaagtgccagggttgttgatcatcagcgtctaagc
agtgctggctatgttttctctgcctctctgccaccctatcttgccagtgccgcagtttct
gctgtaaactacctggaggagaatccttcagttctcgctaacctaaggagcaatgttgct
cttctgcatacaggactgtcagatacaccaggacttgagatttctagccatgtcctgtca
ccaatcgtcttccttaagctgaagaaatcgacaggttcgctggccactgacatagatctt
cttgaaaccattgccgagcaggttttgaaggaagattcagttttcatagtggcgtccaag
aggtcaagtctggacagatgcaagcttcccgtcggaatccggctgttcgtttcagctagt
cacactgaattggacatctccaaagcgtgttcatccttgaaacggatttccgcgtcggtt
ctttcagatcacgtttga
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