Hordeum vulgare subsp. vulgare (domesticated barley): 123449261
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Entry
123449261 CDS
T11213
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123449261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123449261
03036 Chromosome and associated proteins [BR:
hvg03036
]
123449261
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123449261
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123449261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
123449261
NCBI-ProteinID:
XP_044982342
UniProt:
A0A8I6X3N0
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Position
4H:complement(523806456..523813122)
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AA seq
1295 aa
AA seq
DB search
MFSPAIRKPHLHRREKEEATPSPPPPAPVHSPSPGGFALSDRPATGTPAPWTSSSLLARI
STSKQTDRAGDSGQIQPVHVAEFPQVVRNAQANLLQKNFAGKSMLVGGIDKETSLAWMIC
GNELFVWSYLAAVAKDCLALEIPSSLVGDKDGKPLSGNQWTVCIMRWHSSGPSTRNSGDM
LHRRSSTGVILCNGRTQAIAYWPDIYDESSSKGPVLSLFGQTGTSASDAISGCYRFNSLI
AASVPGAAHECIAVASEPTGALWLFQCSPLGIHRRKVHHDTLEDNGTDHSQKNNGGRSLV
WLPSNESSEAAEWKFFLLTSHGIQCWGISLLHGINVKILGSQEIVGSDGELGIKKDIAGQ
KNIWLLDMQIDERGKEFNILVATFCKDRVSGSNYTQYSLLTMLYKSNQKFPSENNVVKCE
RFLEKKAPAQVIIPKARVEDEEVLFSMRLKTGGKPSGSVIILSGDGKATVAIYWRGSTRL
YQFDLPWDAGKVFDASIIPSSEDRDEGAWVVLTEKAGIWAIPEKAVLVGGVEPPERSLSR
KGSCNEAVAEEKRRSQAFSASIVPRRVSSEAWSAGDRQRPTLTGVAQQAVVDEEAEMLLN
RLFHDFILSGAVHEALQKLRVAGAFEKEGEMNVFVRVSKSIVNTLSKHWTTTREAEFLAS
TIVSSLAEKRQKHEKFLQFLVLSKCHEELSSKQRAAMLSVMEHGEKLSGMIHLRELQNAL
SQQSSSTRLSPQSKTPTAGALWNLIQLVGEKARRNTVLLMDRDNAEVFYSRVSDIEDLFY
CLSHQLRYIITGEEHPSVQMQRALELSNACVTLVQAALHYRAEYKDWYPSPEGLTTWNSQ
PVVRSGIWSLASSVMELLRESGSAGMPMKSNLWSQLEGLTDMLLEGYIGLLTAKFERGED
HGVLAQEYCERRDELLGSLYDLAKQIIEAKYQESREGNDNPNLKESIFREVTSPILATAK
RHEGYQTLWQICYDISDTVLLRNLMHDSVGPHGGFSFYVFKQLINSRHYAKLLRLGEEFQ
EELANFLKDRSDLLWLHEICLNQFSTASETLHTCALLSSPGEDVDLTSTRKSMSFVERRR
LLYLSKIAATAGKDVDYEVKVAQIDADIRILKLQEEIVQHDPEYAQGKHTSKLLRPSELI
EMCMKRGRELSLKAFEVFAWTGSSFRSSNKGLLEACWTNAADQDDWVELSQASVSEGWSD
EVIQESLQGMVLFNASRLCYSPDAVVFDGTFEEVLPVRKEDVHARGLEAKCFSVEEVLMQ
HDTFPDAGKLMMTAVVMGKELSYAAPADEPVDMDS
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgccggcgatcaggaagccccacctccaccgcagggagaaggaggaggcgacc
ccttcaccccctcctcctgctcccgtccactccccttcgcccggtggattcgccctctcc
gaccgccccgccactggcaccccggccccatggacctcctcctccctccttgccaggatt
tcgacatcaaagcagacagacagggctggcgattctggccagatccaaccagtgcacgta
gcagagtttccccaagttgtgaggaatgcacaagccaaccttctgcagaagaattttgca
ggcaagagtatgcttgtaggcggcattgacaaagaaacatcccttgcatggatgatatgt
ggaaatgagctttttgtctggagctacttggctgctgttgcaaaagattgtcttgcactt
gagatcccgtcttcgcttgtgggagacaaagacggaaaacccctctctggtaaccagtgg
acggtttgcatcatgagatggcatagtagtggtccatcaacaaggaacagtggagatatg
ttgcaccgaagaagttcgactggtgtcatcctgtgcaacggaagaacacaagctattgcg
tattggcctgatatctatgatgaaagtagtagcaagggtccagttcttagtttatttggc
cagactggcacgtctgcaagtgatgccatatctggatgttacaggtttaactcgctaatt
gcagcttccgttccaggagccgctcatgaatgtattgcggttgcttctgagccaacaggt
gctttatggttgtttcagtgttcaccactgggtattcaccgaagaaaagtccatcatgat
acattagaagataatggtactgatcattctcagaaaaataatggtggaagatccttggtt
tggctaccaagtaatgaatcatccgaggctgctgaatggaagttctttttgttgaccagc
catgggatacaatgttggggcatctcactcttgcatggcatcaatgtaaaaatattaggg
tctcaggaaattgttggtagtgatggtgagttgggcataaaaaaggacatagctggtcaa
aagaacatttggcttttggacatgcagatagatgagcgtgggaaggaatttaatattctt
gttgctaccttctgcaaagatcgggtgagtgggtcaaactacactcagtattcacttctg
acaatgctgtacaaatcaaaccaaaaatttccatccgaaaacaacgtggttaaatgtgaa
aggtttttggagaaaaaagctcctgctcaggtaataatcccgaaagctcgagtggaagat
gaagaagttttgttctctatgaggctaaaaactggcggcaagccttctggctcagtgatc
atcttatcaggtgatggaaaagcaacggtggccatctattggaggggctctacccgactg
tatcaatttgatctgccttgggatgctggaaaggtttttgatgcttccattatcccatct
tctgaggacagagatgaaggagcttgggttgttctgacagaaaaggcaggcatctgggca
atacctgaaaaggctgtattagttggtggggttgagcctccagaacgcagcttatcacga
aaaggtagctgtaatgaagcggtcgctgaagagaaaaggagaagtcaggcattcagtgcc
agtattgttcccagaagagttagctctgaggcttggagtgctggagacaggcaaagacca
acattaactggcgtagctcagcaggctgtggttgatgaagaggctgagatgttacttaat
cggctgtttcatgattttattttgtctggtgctgttcatgaggcacttcaaaagcttaga
gtagcaggggcatttgagaaagagggtgagatgaatgtgtttgttcgagtaagcaaatct
atcgtaaacacattatctaagcactggacaacaactagagaagctgaatttcttgcttca
acaattgtttcatcccttgctgagaaacgtcaaaaacacgagaaattccttcaatttctt
gtcttgtccaagtgccatgaagaactctcttcaaaacaaagagctgcaatgctaagtgtc
atggaacatggagaaaaactctctggaatgatccatctgagagaattacaaaatgcgctt
agccagcagagttcaagcacacgtttatcacctcagtctaaaaccccaactgctggtgca
ctgtggaatctcattcagctggtcggtgagaaagctcgacggaacactgttctattaatg
gaccgtgacaatgctgaagttttctacagtagagtttctgatatagaggatctattttat
tgtttgtcgcatcaacttcggtatattataaccggagaagaacacccatctgttcagatg
caacgtgcacttgagttatcaaatgcttgtgtgaccttagttcaggcagcattgcactac
agagcagagtacaaggactggtatccttctcctgaaggactgacaacatggaacagtcag
cctgtagtgcggtctggaatttggagtctggcatcatctgtgatggagcttttgagagaa
tcaggatctgcaggcatgccaatgaaatctaatctatggtctcagctggaaggactcaca
gatatgctactggagggatatattggtctattaactgccaaatttgaacgtggggaggac
catggtgtgctagcccaagaatactgtgaacggagagatgaacttcttggatccctttat
gaccttgcaaagcaaattatagaagcaaaatatcaggagtcaagagaaggcaatgacaat
cctaatctgaaagaatctatatttagagaggtcacttctcctattttggcaacagctaaa
cggcatgaagggtaccaaactttgtggcagatttgctatgatatcagtgatacggttctc
ctccgcaatcttatgcatgatagtgtaggacctcatgggggattcagtttctacgttttt
aaacaactaatcaacagccggcattacgcaaagttgttaaggctgggagaagaatttcag
gaagagctagctaattttctgaaagaccgcagcgatcttttgtggcttcacgagatatgt
ttaaatcagttctcaactgcttcagagactcttcatacctgtgctctgctttcaagtccg
ggagaagatgttgacctaacaagcaccagaaagtcgatgtcctttgttgaaagaagacgt
ctcctctatctctctaaaattgctgcaaccgcaggtaaggatgttgattatgaagtgaag
gttgcacagatagatgctgatatccggattctgaaacttcaggaagagattgttcagcat
gatccagaatatgcacagggcaaacatacaagcaagcttcttaggccatcagaactgatc
gagatgtgcatgaagagaggccgcgagctctctctcaaagccttcgaagtattcgcctgg
acaggctcctcgttccgaagctccaacaagggcctcctagaggcatgctggacgaacgcg
gccgaccaggatgactgggtcgagctctcacaggcatcagtttcagagggctggagcgac
gaagtcatccaagaatctctccaaggaatggtcctcttcaatgcttcgaggctgtgctac
agcccggacgcggtggtgttcgacggcacgttcgaggaggtgctgcccgtgaggaaagag
gacgtgcacgcgagaggcctggaggctaagtgcttctcggtggaggaggtgctgatgcag
cacgacacttttccggacgccggtaagctgatgatgacggcggtggtgatgggcaaggag
ctatcctatgctgccccggcagatgagcctgtggacatggactcgtga
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