Hordeum vulgare subsp. vulgare (domesticated barley): 123449340
Help
Entry
123449340 CDS
T11213
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123449340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123449340
Spliceosome [BR:
hvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123449340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
123449340
NCBI-ProteinID:
XP_044982472
UniProt:
A0A8I6W7X3
LinkDB
All DBs
Position
1H:complement(493586722..493591453)
Genome browser
AA seq
485 aa
AA seq
DB search
MASLADSFLADLDELSDNEAYPEEDNAEATGMDEDGDDDMPDLESLNYDDLDSVSKLQKT
QRYSDIMQKVEGALDKDTYLSNQGFILEEDPEYQLIVDCNALSVDIENELIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIANEMDITLVDLEGLLPSAVIMVVSVTASTTSGKPL
SQENLVKTIEACDRALNLDAAKKKVLDFVEGRMGYIAPNLSAIVGSAVAAKLMGIAGGLG
ALAKMPACNVQLLGAKKKNLAGFSSATSQFRVGYLEQAEVFQSTPPALRTRACRVIAAKA
TLAARIDSTRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRL
RKMKERYAVTDMMKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQNKLAAK
VAKKFKERSYGTGGATSGLTSSLAFTPVQGIELSNPHAHGNLLGSGTQSTYFSETGTFSR
INNRP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccttgctgattctttcttggccgatcttgacgaactttcagacaatgaagcc
taccctgaagaagacaatgctgaggcaacgggtatggatgaggatggtgacgatgatatg
cctgacctcgagtctcttaattatgatgatcttgacagcgtctcaaaactgcagaagaca
cagcgttatagtgacataatgcaaaaagttgaaggagcacttgacaaagacacatatttg
tctaatcaagggttcatcctggaggaggatccagagtaccagcttattgtagattgcaat
gccttatcagtagatattgagaatgagctcattataatacataatttcatccgtgacaag
tataggctgaagtttcctgaactggaatcgcttgttcatcatccgattgattatgcccgt
gttgttaagaagattgcaaatgagatggatataacactagtagatctggaagggctttta
ccttctgcggttataatggttgtctctgtgacagcatcgacaactagtgggaagcctctt
tctcaggagaatttggtaaaaaccattgaagcatgtgacagagcccttaatcttgatgct
gcaaagaagaaggtgcttgattttgtagagggtagaatgggttacatcgcaccaaatcta
tctgcaatagttggcagtgctgttgctgcaaaattgatgggaattgctggtggtttggga
gcacttgcaaaaatgcctgcttgcaatgttcagctacttggagcaaagaagaaaaatctt
gctggattttctagtgccacgtctcagtttcgtgttggctatcttgaacaagccgaagta
tttcagagcacccctccagccctgaggacccgtgcttgcagggttatagctgcaaaggca
actctagcagcaagaattgattcaactagaggtgatccaactggaaaagctggtcgcaac
ttgttagaagaaattcgcaagaagatcgagaagtggcaagaaccgcctcccgcaaagctt
ccaaaaccacttcctgttccagactctgaacctaaaaagaagagagggggtcgccgcctt
cgaaaaatgaaagaaagatatgccgtgactgatatgatgaagcttgcaaaccgaatgcag
tttggtataccagaggaaagctcattaggtgatggtttgggggaaggttatggcatgctt
gggcaggccggaagtgggaaactacgtgtctcagctgcgcaaaacaaacttgctgccaaa
gtggcaaagaaattcaaggagaggagttatggtaccggtggcgcaacatctggactgaca
tctagtttggcctttacaccagttcagggaatagagctgtcaaacccacatgcgcacggg
aaccttcttggaagcggaacccagagcacctatttctccgagacgggcacattttctcgg
atcaataataggccatga
DBGET
integrated database retrieval system
