Hordeum vulgare subsp. vulgare (domesticated barley): 123449359
Help
Entry
123449359 CDS
T11213
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00450
Selenocompound metabolism
hvg00970
Aminoacyl-tRNA biosynthesis
hvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
123449359
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123449359
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hvg01007
]
123449359
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hvg03016
]
123449359
Enzymes [BR:
hvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
123449359
Amino acid related enzymes [BR:
hvg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
123449359
Transfer RNA biogenesis [BR:
hvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
123449359
Prokaryotic type
Other AARSs
123449359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
Anticodon_3
tRNA-synt_1e
Anticodon_1
HVO_0758
Motif
Other DBs
NCBI-GeneID:
123449359
NCBI-ProteinID:
XP_044982495
UniProt:
A0A8I6Y1C3
LinkDB
All DBs
Position
4H:complement(539449876..539457388)
Genome browser
AA seq
600 aa
AA seq
DB search
MAAGRAFFCAPSSIGATARRLAFASPPARPLASAPHRRGRARCCASISSSSDASAPAPPP
YVLTTPLYYVNAPPHMGSAYTTIAADAVARFQRLLEKRVIFITGTDEHGEKIATSAEASG
RNPKEHCDIISNSYKMLWADLDIEYDKFIRTTDPKHEAVVNDFYSRVLSSGDIYRADYEG
LYCVSCEEYKDEKELAENNYCPVHLKPCVPRKEDNYFFALSKYQHKLEELLTRNPNFVRP
SHRLHEVEGWIKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYLSASLDDGEQA
SLQQAVDRGWPASLHLIGKDILRFHAIYWPAMLMSAGISVPDAVFGHGFLTKDGMKMGKS
LGNTLEPKDLVGRFGADAVRYFFLREVEFGNDGDYSEERFINTVNAHLANTIGNLLNRTL
GLLKKNCNSMLAFDSIAAADGNSFKNNVENLVDKAKGHYENLSLTSACETVLEIGNLGNL
YIDEQAPWSCFKQGGEVAEQAAKDLVIILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQ
FRTLRWDDTKWGALKAGQAMMEPKPIFAKIETEVEENGQASPKEGKGGKKKARSKGLVEA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgggcgggccttcttctgcgccccctcctccatcggagccaccgcccgtcgg
ctggccttcgcctcacccccggcccgtcccctcgcctccgcgccccaccgccgcggccgc
gcccgctgttgcgcctcaatctcctcgtcctcagatgcctccgcgcccgcgccgccaccc
tatgtgctcaccacgccgctgtactacgtcaacgcgccgccgcacatgggcagcgcgtac
acgaccatcgccgccgacgccgtcgcccgattccagagattgctagagaagagggttata
ttcatcactggaacagatgaacatggtgaaaaaattgccacctctgcagaggccagtggt
agaaaccccaaggagcactgcgatataatttcaaattcatacaagatgctttgggctgat
ctagacatcgagtatgataagtttattcgcacaaccgatcctaagcacgaggctgttgtt
aatgacttctattctagagttctaagtagtggtgacatatatagggctgattacgaaggg
ctttactgtgtcagctgcgaggagtacaaggatgaaaaagagttggcggaaaataattac
tgtcctgtgcacctgaagccttgtgtacctagaaaggaagataactatttctttgccttg
tcaaaatatcagcataaattagaagagctactgacaagaaatcccaattttgtaaggcca
tcacatcgtttgcacgaggtcgaaggctggattaaaagtggattgagagacttctctatt
tctcgcgcatctgtcgagtggggtattccagtgccaaatgacaccaaacaaacaatatat
gtgtggtttgatgccttattaggttatctttcagcatccctagatgacggggaacaggca
agtttgcagcaagctgttgatcggggttggcctgcatctctacacctgataggaaaggac
atattgcggtttcatgcaatttattggccagcaatgttaatgtcagcagggataagcgtt
cctgatgcagtttttggtcatggattcttgacaaaggatggcatgaagatgggaaaatca
ctaggcaacacacttgaaccaaaggatctagtaggcagatttggcgcagatgctgttagg
tacttcttcttgcgggaagtagaatttggcaatgacggggactattcagaagaacgtttt
atcaatacagtcaacgcacatcttgctaacacaattggaaatcttctcaaccgcacactt
ggtctcctaaaaaagaactgcaattccatgctagcttttgattcaattgctgctgcagat
ggcaattcattcaagaataatgttgaaaacttggtggacaaggcgaagggtcattatgaa
aatctttcgttgacatcagcatgtgaaactgttctagaaattggtaacttgggaaacttg
tacattgacgagcaagcaccatggtcttgtttcaagcaagggggtgaggttgctgaacag
gctgcaaaggatctcgtcattattctagaggcaatgagaataattgcaatagcgttgtct
ccaatcactccaagcctttcgttgaggatttatacacagcttggtttcacagaagaccag
tttcgtacgttgagatgggatgataccaaatggggagcccttaaagcaggccaggcaatg
atggagccgaagcctattttcgctaaaatagaaaccgaagtcgaagagaacggtcaagca
agtccgaaggaggggaagggcgggaagaagaaagcacgtagcaaagggctcgtggaggca
tga
DBGET
integrated database retrieval system
