Hordeum vulgare subsp. vulgare (domesticated barley): 123449462
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Entry
123449462 CDS
T11213
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123449462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123449462
03009 Ribosome biogenesis [BR:
hvg03009
]
123449462
04131 Membrane trafficking [BR:
hvg04131
]
123449462
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123449462
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123449462
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
123449462
Membrane trafficking [BR:
hvg04131
]
SNARE
SNARE associated proteins
Others
123449462
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123449462
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123449462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
AAA_2
CDC48_2
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
nSTAND3
RNA_helicase
Mg_chelatase
AAA_28
AAA_17
AAA_18
IstB_IS21
ABC_tran
Vps4_C
ATPase_2
Parvo_NS1
Viral_helicase1
AAA_7
Zeta_toxin
ResIII
NB-ARC
TsaE
DUF815
NACHT
AAA_lid_PRS2_C
Sigma54_activ_2
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
123449462
NCBI-ProteinID:
XP_044982634
UniProt:
A0A8I6Y1N3
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All DBs
Position
4H:complement(552503632..552508287)
Genome browser
AA seq
817 aa
AA seq
DB search
MATPNPPPQQGEPSSSADPKAKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTME
RLQLFRGDTVLLKGKKRKDTICIVLADDTCDEPKVRMNKTVRKNLRVRLGDVVSVHQCPD
VKYGKRVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIE
TDPAEYCIVAPDTEIFCDGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQ
LFKSIGVKPPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRK
AFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATN
RPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVELEHISRDTHGYVG
ADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETV
VEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA
KAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGS
SVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP
DVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKYAIRENIEKDIE
RERRRKDNPEAMEEDEVDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF
GSEFRFPDQPAAGTASAAAADPFASAAAAAEDDDLYS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccccaacccgccgccccagcagggcgagccctcctcctccgccgatcccaag
gccaagaaggactactcgacggcgatcctcgagcggaagaagagccccaaccgcctcgtc
gtcgacgaggccaccaatgacgacaactccgtcgtcgccctccaccccgacaccatggag
aggctccagctcttccgcggcgacaccgtcctcctcaagggtaaaaagaggaaagacaca
atctgcattgttcttgctgatgacacatgtgatgagccgaaggtcagaatgaacaaaacc
gtcaggaaaaacttgagagtgagacttggtgatgtggtgtctgttcaccaatgccctgat
gtcaaatacgggaagcgtgtgcacatacttcctattgatgacacagttgaagggattaca
ggaaacttgtttgacgccttcttgaaaccatatttccttgaagcttaccgtcctttgaga
aagggagatcttttcctcgtgagaggtggaatgagaagtgtggagttcaaagttatagag
actgacccagcagagtattgcattgttgcaccagacactgagatattctgtgatggtgag
cctgttaagagggaggacgaggaaaggcttgatgatgttggctacgatgatgttggtgga
gtcaggaagcaaatggcccagatcagagaactggttgaactcccactgcgtcaccctcaa
cttttcaagtctattggtgtgaagcctcccaagggcatactgctgtttggacctcctggc
tctggcaagactcttattgcgagggctgttgccaatgaaacaggcgcattcttctttctg
attaatggcccagaaattatgtccaagttggcaggagaaagtgagagcaacctcagaaag
gcatttgaagaagcagagaagaatgcaccatcaatcatcttcattgatgagattgattca
atagccccaaagagagagaagaccaatggagaagttgaaaggcgtattgtttctcagctg
ttgactcttatggacggtcttaaatcccgtgcacatgttattgttatgggtgctacaaac
cgcccaaacagtattgatcctgctctcagaagatttggtaggtttgatcgtgagattgac
attggagtccctgatgaagttgggcgccttgaagttctcaggattcacaccaaaaacatg
aagttggctgaagatgttgaactggaacacatttcacgagacacccatggttatgttggt
gctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgagaagatggac
attatagatcttgaggatgagaccatagatgctgagatactgaattccatggctgttaca
aacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgtgaaactgtt
gttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacgggag
ctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatg
tccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggcc
aaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgctt
accatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctaggggg
tcagcaccatgtgtcctcttctttgatgagcttgactctattgctacccagagaggaagc
agtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctgactgagatg
gatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccagacatc
atcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccctcttcct
gatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtctcctttggccaag
gatattgatctcagtgctctggccaagtacacccaaggattcagcggtgctgatatcacc
gaaatttgccagcgtgcttgcaagtacgccatcagggagaacattgagaaggacatcgag
agggagaggcggaggaaggacaaccccgaagcaatggaggaggatgaggtggacgaggtg
gctgagatcagagctgcccacttcgaggagtcgatgaagtatgcccgccggagtgtgagc
gacgccgacatccgcaagtaccaggcctttgcccagactctgcagcagtcccgtggattc
ggcagcgagttccggttccctgatcagccggccgcgggcaccgcctccgccgctgctgcc
gatccttttgcatccgctgcagcagcagctgaagatgacgacttatatagctaa
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