Hordeum vulgare subsp. vulgare (domesticated barley): 123449463
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Entry
123449463 CDS
T11213
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123449463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123449463
03009 Ribosome biogenesis [BR:
hvg03009
]
123449463
04131 Membrane trafficking [BR:
hvg04131
]
123449463
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123449463
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123449463
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
123449463
Membrane trafficking [BR:
hvg04131
]
SNARE
SNARE associated proteins
Others
123449463
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123449463
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123449463
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_33
AAA_16
AAA_2
CDC48_2
AAA_22
AAA_5
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
Mg_chelatase
AAA_17
AAA_28
AAA_18
ABC_tran
Vps4_C
ATPase_2
Viral_helicase1
nSTAND_NTPase5
Parvo_NS1
AAA_7
IstB_IS21
NB-ARC
Zeta_toxin
ResIII
TsaE
DUF815
NACHT
AAA_lid_PRS2_C
AstA_C
Zot
Motif
Other DBs
NCBI-GeneID:
123449463
NCBI-ProteinID:
XP_044982635
UniProt:
F2EL23
A0A8I7B7K1
LinkDB
All DBs
Position
4H:complement(552775866..552780201)
Genome browser
AA seq
813 aa
AA seq
DB search
MAAPTPQGEASSSDPKSKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQL
FRGDTVLLKGKKRKDTICIVLADDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYG
KRVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPA
EYCIVAPDTEIFCDGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKS
IGVKPPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE
AEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNS
IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVELEHISRDTHGYVGADLA
ALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVVEVP
NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA
NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSSGD
AGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDS
RHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERR
RKDNPEAMEEDEVDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEF
RFADQPAAGAASAAAADPFASAASAADDDDLYS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccgacgccgcagggcgaggcctcctcctccgatcccaagtcgaagaaggac
tactcgacggccatcctcgagcggaagaagtcccccaaccgactcgtcgtcgacgaggcc
accaacgacgacaactccgtcgtcgccctccaccccgacaccatggagaggctccagctc
ttccgcggcgacaccgtcctgctcaagggtaagaaaaggaaggatacaatctgcattgtg
cttgcagatgacacttgtgaggagccaaaaatcagaatgaacaagaccgtcaggaaaaac
ttgcgagtgcgacttggtgatgtggtgtctgttcaccaatgcccagacgtgaaatacggc
aagcgtgtgcacatacttcctattgatgacacagttgaaggcattactggaaacttgttt
gatgccttcttgaaaccatacttccttgaagcttaccgtcctttaaggaagggagatctt
ttccttgtgaggggaggaatgagaagtgtggaattcaaagttatagagacagaccctgca
gagtattgcatcgttgcacccgacactgagatattctgtgatggtgagcctgttaagagg
gaggatgaggagaggcttgacgatgttggctatgatgatgttggtggagttaggaagcaa
atggcccagatcagagaactggttgaactcccactgcgtcaccctcagcttttcaagtct
attggcgtgaagcctccaaagggcatattgctgtttggtccacctggctctggcaagacc
cttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatggccca
gaaattatgtccaagttagcaggagaaagtgagagcaatctcaggaaggcatttgaagaa
gctgagaagaacgcaccatccatcattttcattgatgagattgattcaatagccccgaag
agagagaagaccaatggagaagttgaaaggcgtattgtttcacagctgttgactcttatg
gatggacttaaatcccgtgcacatgttattgtcatgggtgctacaaaccgcccaaacagt
atagatcctgccctcagaagatttggtaggtttgacagggagattgatattggagtccct
gatgaagttgggcgccttgaggttctccggattcacaccaaaaacatgaagttggctgaa
gatgtggaactggaacatatttcaagagatactcatggatatgttggtgctgatcttgct
gctctttgcactgaggctgctctccaatgcattcgtgagaagatggatattattgatctt
gaggacgagacaatagatgctgagatactcaactctatggccgtgacaaatgaccatttc
aagaccgccctgacgacaagcaatccgtctgctctccgtgaaactgttgttgaagttccc
aatgtttcttgggaagatattggtggtcttgagaatgtcaaaagggagttgcaggagact
gtccaataccctgtggagcatcctgagaaatttgagaagtttggcatgtctccttccaag
ggtgttctgttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgca
aatgagtgtcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggttt
ggtgagagtgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgt
gtgctcttctttgatgaacttgactcgattgctacccagagaggaagcagcagtggggat
gctggaggtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaat
gctaagaaaaccgtcttcatcattggtgctaccaacaggccagacatcatagaccctgcc
ctgcttaggccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcg
aggcaccagatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatctg
agtgctcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccag
cgtgcttgcaagtatgccatcagggagaacatcgagaaggacatcgagagggagaggcgg
aggaaggacaaccctgaagcgatggaggaggacgaggttgatgaggttgcagagatcagg
gctgcccacttcgaggagtcgatgaagtatgcgcgtcgtagtgtgagtgacgccgacatc
cgcaagtaccaggcctttgcccagacgctgcagcagtctcgtggattcgggagcgagttc
cggttcgctgaccagccggctgcgggcgctgcctctgccgctgcggccgacccttttgca
tccgctgcctcagcagccgatgatgatgatttatatagttaa
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