Hordeum vulgare subsp. vulgare (domesticated barley): 123449474
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Entry
123449474 CDS
T11213
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123449474
Spliceosome [BR:
hvg03041
]
Common components
Common spliceosomal components
General mRNP proteins
123449474
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GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
123449474
NCBI-ProteinID:
XP_044982647
UniProt:
A0A8I6XHJ9
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Position
4H:complement(553952423..553959480)
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AA seq
543 aa
AA seq
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MDFDEYEYLEKTVEASAPAPANGSEGKERSSRRRSSAGDGEDRDDGERRSKRSRSEHRDR
DRDRERDRDRDPESRERHRSSRERRDRDRDRDRDVREKERLSREGERERRSRDHDREREK
EKERERRSRSRSERRRDDDERERERFRERDYRDRDVRRRKEDGAEPEADPERDQRTVFAY
QLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAITLNNQLL
LGQPVAVKPSEAEKNLVQSNASSSVAASGGARKLYVGNLHANITEEQLRLVFEPFGLVEL
VQLPVDPLTGLCKGFGFVQFARLEDAKAAQSLNGQLDIAGKVIKVSAVTDHVGAQASGAA
PGDLDDDEGGGLALNASSRALLMQKLDRSGATTSLTSGLGASAVALPQPASVLGAPAAGT
ALQPMVPGLGLIPGASVPVITQTIDMAPPSECLLLKNMFDPAVETDPDFDLDIRDDVREE
CSKFGQVRHIFVDKNTAGFVYLRFDSITAAMGAQKALQGRWFAGKMITATFMSIQQYEMK
FPE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgagtacctcgagaagacggtcgaggcctccgccccggccccg
gccaacggatccgaggggaaggagcgcagctcccgccgccggagcagcgccggcgacgga
gaggaccgcgacgacggcgagcgcaggtccaagcgctctcgctccgagcaccgcgaccgc
gaccgcgacagggagcgggaccgcgaccgtgaccctgagagccgggagcgccaccgcagc
agccgggagcgccgggaccgcgaccgggaccgggaccgggacgtgagggagaaggagagg
ctgagcagggagggcgagcgggagaggaggagccgcgaccatgaccgcgagcgggagaag
gagaaggagagggagcggaggagccgcagccggtcggagcgtcgccgcgacgacgacgag
cgtgagcgcgagcgcttccgtgagcgtgactaccgtgaccgcgacgtcagacgtaggaaa
gaagacggtgctgaacctgaagcagatccagaaagagatcaaagaactgtatttgcctac
cagctatccttgaaagcggatgaaagagacgtttacgagttcttctcgagggctgggaag
gtccgggatgtccgcttaataatggatcggaactcacgacgttcaaaaggagttgggtac
attgaattttatgacgtcatgtcggttccaatggcgattactcttaataatcagctgctt
cttggtcaaccagtggcggttaagccatcggaggctgagaagaatctagttcagtctaat
gcttcttcaagtgtagcagcttcagggggggcaaggaagttgtatgttggaaatcttcac
gccaatattacagaggagcaattgagactggtcttcgaaccatttggactggttgagctt
gtccagctgcctgtagacccacttactggattatgtaaaggttttggttttgtgcagttt
gcacgtctggaagatgcaaaagctgctcagagtttaaatggtcaacttgacattgctgga
aaagtaatcaaggtttcagctgtgacggaccatgtgggagcgcaagccagtggggcagcg
ccaggcgatttggatgatgacgaaggtggaggcttggcactgaatgctagttcgagagct
cttcttatgcagaaactggaccgtagtggtgctaccaccagtttgacttctgggttgggt
gcttctgccgtggcattgccacaacctgcatcagttcttggtgctcctgcagccggcact
gctctacagcctatggtgcctggtcttggtttaattccaggggcatctgttccggttatt
acccagaccattgacatggctccacctagtgaatgcctattgctgaagaatatgtttgat
cctgctgtggagacggatccggattttgatttagatattagagatgacgttcgagaagaa
tgttctaagtttgggcaagtaagacacatttttgtagacaaaaataccgcgggctttgtg
tatctgcggttcgatagcataacagccgccatgggcgcacagaaagcacttcaagggaga
tggtttgcgggaaagatgataactgcaacatttatgtccattcagcaatacgaaatgaag
ttcccagagtga
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