Hordeum vulgare subsp. vulgare (domesticated barley): 123449639
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Entry
123449639 CDS
T11213
Name
(RefSeq) metal transporter Nramp5-like
KO
K21398
natural resistance-associated macrophage protein 2
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
123449639
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hvg02000
]
123449639
Transporters [BR:
hvg02000
]
Solute carrier family (SLC)
SLC11: Proton-coupled metal ion transporter
123449639
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GFIT
Motif
Pfam:
Nramp
Motif
Other DBs
NCBI-GeneID:
123449639
NCBI-ProteinID:
XP_044982861
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Position
4H:572466425..572471348
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AA seq
542 aa
AA seq
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MEIEREAPGSERGRSWRANPAAAQDAQGEKKFGDGDETFVKEPAWKRFLSHVGPGFMVSL
AYLDPGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVVTGKHLAEICKSEYP
KPVMICLWLLAEVAVIAADIPEVIGTAFAFYLLFRIPVWIGVLITGSSTLLLLGLQRYGV
RKLEFLISMLVFVMAACFFGELSIVKPPAKEVLKGLFIPKLKGNGATADAIALLGALVMP
HNLFLHSALVLSRKTPSSVRGIKDACRFFLYESGFALFVALLINIAVVSVSGTVCFGENL
SAEDIDKCSDLSLDNSSFLLKNVLGRSSSIVYGVALLASGQSSTITGTYAGQYIMQGFLD
IKMKTWLRNLMTRCIAIAPSLVVSIIGGSNGAGRLIIIASMILSFELPFALIPLLKFSSS
SSKMGPHKNSIYIIVFSWTLGLMLIGINVYFLSTSFMGWLINSSLPTYAKVLVGVVVCPL
MLVYLVAVVYLTFRKDTVVTFVADSCKADAEKAAGGSGEDDDEPVPYREDLADIPLPAHS
RG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgagagggaggcgccgggcagcgagagggggaggagctggcgagccaacccc
gcggccgcgcaagatgcgcagggtgagaagaagtttggagacggcgatgagacgttcgtc
aaggagccggcatggaagcggttcctctcccatgttggaccagggttcatggtgtccctc
gcctacctggatcctggcaacttggagacggacctgcaagccggagccaatcacagatat
gagctcctctgggtgattctgattggcctcatcttcgcgctgatcatacagtcgctagca
gcgaaccttggcgtggttacgggaaagcatctcgccgagatatgcaagagcgagtatccg
aagcccgtgatgatctgcctctggcttctcgcggaggtggcggtgatcgccgccgatatc
ccggaagtgatcgggacggccttcgctttctacctcttgttccgcatcccggtgtggatc
ggggttctaatcaccggctccagcacgctcctcctcctcggcctgcaaagatacggggtg
cggaagctggagttcctcatctcgatgctcgtcttcgtcatggcggcgtgcttcttcggg
gagctgagcatagtgaagcctccggcgaaggaggtcctgaaagggctgttcattcccaag
ctcaagggaaatggcgccaccgcagacgccattgccctccttggagctctagttatgcct
cacaacctgttcttgcattcggcgttggtgctgtccagaaagacgccgtcgtcagtaaga
ggaatcaaggacgcttgcaggttcttcctctacgagagcggattcgcgctgttcgtggcg
ctgctcatcaacatcgccgtcgtctccgtgtccgggactgtctgcttcggggaaaatctc
tcggcggaggacatcgacaaatgcagtgacctcagcctggacaactcctcgttcctgctc
aagaacgtgctgggcaggtcgagctcgatcgtgtacggggtggcgctgttggcgtcaggg
cagagctcgaccatcaccggcacatacgccggccagtacatcatgcaggggttcttggac
atcaagatgaagacgtggctgaggaacctgatgacgcgctgcatcgccattgcgcccagc
ctagtcgtctccatcatcggcgggtcgaatggagccggccgcctcatcatcatcgcgtcg
atgatactgtcgtttgagctgccatttgcactcatcccgcttctcaagttcagcagcagc
agcagcaagatgggcccgcacaagaactccatctacatcatcgtgttctcgtggacgctt
gggctgatgctcatcggcatcaacgtctactttctcagcacgagcttcatggggtggctc
atcaacagctcgctgccaacgtacgccaaggtgctggtcggagtcgtcgtctgcccgctg
atgctcgtctacctcgtcgctgtcgtctacctcaccttcaggaaggacaccgtcgtcacc
ttcgtcgccgactcgtgcaaggccgacgccgagaaggcggcgggcggcagcggggaggac
gacgacgagcccgtgccctaccgtgaggacctcgcagacataccgctcccggcccacagc
agaggctag
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