Hordeum vulgare subsp. vulgare (domesticated barley): 123450031
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Entry
123450031 CDS
T11213
Name
(RefSeq) AP-2 complex subunit alpha-1-like isoform X1
KO
K11824
AP-2 complex subunit alpha
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123450031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123450031
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123450031
Membrane trafficking [BR:
hvg04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
123450031
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
123450031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptin_C
Alpha_adaptinC2
Cnd1
Motif
Other DBs
NCBI-GeneID:
123450031
NCBI-ProteinID:
XP_044983361
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Position
4H:complement(605822480..605833653)
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AA seq
1073 aa
AA seq
DB search
MALSGMRGLSVFISDIRNCHNKEQERLRVDKELGNIRTRFKNEKGLSHYEKKKYVWKMLY
IHMLGYDVDFGHMETVSLISAPKYPEKQVGYIVTSCLLNENNDFLRMVINTVRNDIIGRN
ETYQCLALTMVGNIGGKEFSESLAPDVQKLLISSSCRPVVRKKAALCLLRLYRKNPDVVN
IDGWSDRMAQLLDERDLGVLTSVMSLFVSLVSNNAEAYWNCLPKCVRILERMARNQDIPQ
EYTYYGIPSPWLQVKAMRALQYFPTIEDPSARRALFEVLQRILMGTDVVKNVNKNNASHA
VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMSRMLLVTDVQDIIKR
HQAQIITSLKDPDISIRRRALDLLYGMCDVTNAKEIVEELLQYLNTAEFAMREELALKAA
ILAEKFAPNLSWYVDVILQLIDKAGDFVSDDIWYRVVQFVTNNEDLQAYAAAKAREYLDK
PALHETMVKVSAYLLGEYGHLLAQRPGCSPKELFTIINDRLPTVSSSTVAIIISAYAKIL
MHTQPPDAGLQQQILTIFKKYQFTRSALMTCHLLYVCEVFFTLTLHFRHESYIDVEIQQR
AVEYFELSRKGPALADVLAEMPKFPERESALLKKAEDAEVDTAEQSAIKLRSQQQSSSAL
VVAAQPPVNGPAPAANHLTLVKMPSQNIADESNVSHDSHEETAVEAPKENGAPVEVQRNV
EIIPETAPVSKVEPPASHPASQADLLADLLGPLAIEGPPAAVEQIPAQGLEANQSPVGDL
ALATLEDQSNSVQPIVNVEEKFNVLCTKDSGVLYEDPNIQIGLKAEWRAHHGRLILFLGN
KNTSPLMSLRALILPPSHFKVELSSVPDTIPPRAQVQIPVEVTNLRASRDVAVLDFSYKH
GATLVNAKLRLPIVLHKFLQPITLSPEDFFAHWKTWNVQSLKVQEVVRGVKPLPIPEMAS
LLLSLHLAVTPGLDTNPNNMVACATFFSETTNAALCLVRVETDPQDRTQLRLTVASGDQN
LTFELKEYIKEHLIDIPRARVTSPPAPQQAQVAPAATAPATYNDPGAMLAGLL
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctcggggatgcgggggctgtccgtcttcatcagcgacatccgcaactgccac
aacaaggagcaggaacgcctccgcgtagacaaggagctcggcaacatccgaacccgcttc
aaaaacgagaagggattgtcgcattacgagaagaaaaagtatgtttggaaaatgctttat
atacatatgctgggttacgatgttgattttggacatatggaaactgtttctttgatatcc
gcgccgaagtatcccgagaaacaggttggatacatcgtgacatcttgcttacttaacgag
aacaatgattttttaaggatggtcataaatacagtacgcaatgacatcataggccgaaat
gagacttatcagtgcttagcgttgacgatggtaggtaatattggcgggaaagaattttct
gagtcgttggcccctgatgtccagaaacttcttatttcaagtagctgccggcctgttgtc
agaaagaaggctgctctatgccttctgcgactttataggaagaacccagatgttgtgaat
atcgatggctggtctgatcggatggcacaacttctagatgagcgtgatctaggtgtgctg
acatctgtcatgagcctttttgtctcactagtatctaataatgctgaagcatattggaat
tgccttccaaagtgtgtaagaatattggagaggatggcaagaaaccaagatattccccaa
gaatacacctactatggaattccatctccttggcttcaggttaaggcaatgagagctctt
cagtacttccctaccattgaagatcctagtgcaaggcgagctttgtttgaggttttacag
cgtattttgatgggtactgatgttgttaagaacgtcaacaagaataatgcctcacatgct
gtcctctttgaagctcttgctctggtaatgcatcttgatgctgaaaaggagatgatgtcc
caatgcgtggctcttctcggcaagtttattgctgtcagggagcccaatattaggtatctt
ggtctggagaacatgagtagaatgctgttagtaacagatgtacaggatataataaaaagg
caccaggctcagatcattacgtctttgaaggatccagatatcagcattagaaggcgggct
cttgatttgctgtatggcatgtgtgatgttacaaatgcaaaggaaattgttgaggagttg
ttgcagtatcttaacacagctgaatttgcaatgcgtgaagagctggctctgaaggcagcc
attcttgcagagaagtttgctccaaatctttcatggtatgttgatgttatacttcagttg
atagacaaagcaggagattttgtaagtgatgatatatggtatcgagtggtacagtttgtc
accaacaatgaggatcttcaggcatatgctgcagctaaggcaagggaataccttgacaag
cctgctttgcatgagaccatggtcaaggtcagtgcttaccttcttggagagtatggccac
cttttggcccaaagacctggttgtagccccaaggagttgtttaccattataaatgacagg
ctcccaacagtatcgtcaagtactgttgccattattatctcagcctatgccaagatactt
atgcacactcagcctcctgatgcgggactgcagcaacaaatcctgacaatatttaaaaag
taccaatttactcgttctgctttgatgacgtgccaccttttgtatgtctgtgaagttttt
tttacgcttacattacatttcaggcatgagagttatattgatgttgaaattcagcagaga
gcagttgaatattttgaactaagcagaaagggtcctgctttggctgatgtattggctgaa
atgccaaaatttcctgaacgtgagtctgctctgttgaaaaaggctgaagatgctgaagtt
gacacagcagagcagagtgccataaaactgcgaagtcagcaacaatcatccagtgctctt
gttgtagctgctcagccccctgtaaacggaccagcaccagctgctaatcatctcactctt
gtgaagatgccaagtcaaaatattgctgatgagagcaatgtcagtcatgacagtcatgaa
gaaaccgcagtagaagctcctaaagaaaatggtgctcccgtcgaagttcagagaaatgtc
gagatcatccctgagaccgctcctgttagtaaagttgagcctcctgcatctcatcctgct
tctcaagcagacctccttgcagaccttttgggcccgcttgcaatagagggtcctcctgct
gctgtagagcaaattcctgctcaaggcttggaggctaatcaaagtccagtaggtgacttg
gcactagctacccttgaggaccagtccaactctgttcagccaattgtcaatgttgaggag
aagttcaatgtattgtgcacgaaagatagtggagttctgtatgaggatcctaacatccag
attggtttgaaagcagagtggcgggcccatcatggtcgtcttattcttttcctggggaat
aaaaacacttcgcctcttatgtcattgcgggctctgattttgcctcctagccatttcaaa
gtggagctctcgtcagttcctgatactattcctcctagagcacaggtgcaaatcccagtc
gaggttacaaatctccgcgcgagtagagatgttgctgttcttgatttctcatataaacat
ggagcaacactggtgaacgctaaacttcggctccctattgtattgcataaattcttgcaa
cctataacactttcccctgaagattttttcgcccattggaaaacatggaatgttcagtca
ctcaaggttcaggaagtggttagaggtgtaaaaccattacctattcctgagatggctagt
cttctcctgagccttcatctggcagttactcctggacttgataccaaccccaacaacatg
gtggcgtgcgctacattcttttcggaaacaaccaatgccgcgctttgcttggtgagagtt
gagacagatccccaagacaggacccaactccggctaacagtggcatcaggagatcaaaat
ctgacattcgagttgaaggagtacatcaaggaacatttgatcgacatcccgagggctcga
gtgacctcccctcctgcaccgcaacaagcgcaggtggctccagcagcaacagcccccgcg
acatataacgaccctggtgccatgctagctgggttgctatga
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